Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl35Q9CQL6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl35Q9CQL6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl35Q9CQL6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl35Q9CQL6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.1■□□□□ 0.33
Mrpl35Q9CQL6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.1■□□□□ 0.33
Mrpl35Q9CQL6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.1■□□□□ 0.33
Mrpl35Q9CQL6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl35Q9CQL6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl35Q9CQL6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl35Q9CQL6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl35Q9CQL6 Gm11599-201ENSMUST00000118720 878 ntBASIC17.09■□□□□ 0.33
Mrpl35Q9CQL6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.09■□□□□ 0.33
Mrpl35Q9CQL6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl35Q9CQL6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl35Q9CQL6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl35Q9CQL6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl35Q9CQL6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl35Q9CQL6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl35Q9CQL6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl35Q9CQL6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl35Q9CQL6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl35Q9CQL6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mrpl35Q9CQL6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl35Q9CQL6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mrpl35Q9CQL6 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.04■□□□□ 0.32
Mrpl35Q9CQL6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mrpl35Q9CQL6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mrpl35Q9CQL6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl35Q9CQL6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.03■□□□□ 0.32
Mrpl35Q9CQL6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mrpl35Q9CQL6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl35Q9CQL6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl35Q9CQL6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl35Q9CQL6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl35Q9CQL6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Mrpl35Q9CQL6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl35Q9CQL6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl35Q9CQL6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.02■□□□□ 0.31
Mrpl35Q9CQL6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.01■□□□□ 0.31
Mrpl35Q9CQL6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mrpl35Q9CQL6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mrpl35Q9CQL6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mrpl35Q9CQL6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Mrpl35Q9CQL6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17■□□□□ 0.31
Mrpl35Q9CQL6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mrpl35Q9CQL6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Mrpl35Q9CQL6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mrpl35Q9CQL6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mrpl35Q9CQL6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mrpl35Q9CQL6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mrpl35Q9CQL6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mrpl35Q9CQL6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mrpl35Q9CQL6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mrpl35Q9CQL6 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.99■□□□□ 0.31
Mrpl35Q9CQL6 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.99■□□□□ 0.31
Mrpl35Q9CQL6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mrpl35Q9CQL6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mrpl35Q9CQL6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mrpl35Q9CQL6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mrpl35Q9CQL6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mrpl35Q9CQL6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mrpl35Q9CQL6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mrpl35Q9CQL6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mrpl35Q9CQL6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mrpl35Q9CQL6 Gm37136-201ENSMUST00000194368 194 ntBASIC16.96■□□□□ 0.31
Mrpl35Q9CQL6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mrpl35Q9CQL6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mrpl35Q9CQL6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.96■□□□□ 0.3
Mrpl35Q9CQL6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mrpl35Q9CQL6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mrpl35Q9CQL6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mrpl35Q9CQL6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mrpl35Q9CQL6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mrpl35Q9CQL6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Mrpl35Q9CQL6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mrpl35Q9CQL6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.94■□□□□ 0.3
Mrpl35Q9CQL6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Mrpl35Q9CQL6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Mrpl35Q9CQL6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mrpl35Q9CQL6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mrpl35Q9CQL6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mrpl35Q9CQL6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mrpl35Q9CQL6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mrpl35Q9CQL6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mrpl35Q9CQL6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mrpl35Q9CQL6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Mrpl35Q9CQL6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mrpl35Q9CQL6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mrpl35Q9CQL6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Mrpl35Q9CQL6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mrpl35Q9CQL6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mrpl35Q9CQL6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mrpl35Q9CQL6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mrpl35Q9CQL6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.89■□□□□ 0.29
Mrpl35Q9CQL6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mrpl35Q9CQL6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mrpl35Q9CQL6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Mrpl35Q9CQL6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mrpl35Q9CQL6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms