Protein–RNA interactions for Protein: Q9CQ82

Itgb3bp, Centromere protein R, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3bpQ9CQ82 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Itgb3bpQ9CQ82 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Itgb3bpQ9CQ82 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.31■■□□□ 1
Itgb3bpQ9CQ82 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Itgb3bpQ9CQ82 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Itgb3bpQ9CQ82 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Itgb3bpQ9CQ82 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.3■■□□□ 1
Itgb3bpQ9CQ82 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Itgb3bpQ9CQ82 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.29■■□□□ 1
Itgb3bpQ9CQ82 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Itgb3bpQ9CQ82 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Itgb3bpQ9CQ82 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Itgb3bpQ9CQ82 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Itgb3bpQ9CQ82 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Itgb3bpQ9CQ82 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Itgb3bpQ9CQ82 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Itgb3bpQ9CQ82 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Itgb3bpQ9CQ82 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Itgb3bpQ9CQ82 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Itgb3bpQ9CQ82 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Itgb3bpQ9CQ82 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Itgb3bpQ9CQ82 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.26■□□□□ 0.99
Itgb3bpQ9CQ82 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Itgb3bpQ9CQ82 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.25■□□□□ 0.99
Itgb3bpQ9CQ82 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.25■□□□□ 0.99
Itgb3bpQ9CQ82 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Itgb3bpQ9CQ82 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Itgb3bpQ9CQ82 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Itgb3bpQ9CQ82 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Itgb3bpQ9CQ82 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Itgb3bpQ9CQ82 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Itgb3bpQ9CQ82 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Itgb3bpQ9CQ82 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Itgb3bpQ9CQ82 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Itgb3bpQ9CQ82 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Itgb3bpQ9CQ82 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Itgb3bpQ9CQ82 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Itgb3bpQ9CQ82 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Itgb3bpQ9CQ82 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Itgb3bpQ9CQ82 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Itgb3bpQ9CQ82 Gm45855-201ENSMUST00000212546 880 ntBASIC21.22■□□□□ 0.99
Itgb3bpQ9CQ82 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Itgb3bpQ9CQ82 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Itgb3bpQ9CQ82 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Itgb3bpQ9CQ82 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Itgb3bpQ9CQ82 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Itgb3bpQ9CQ82 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.21■□□□□ 0.99
Itgb3bpQ9CQ82 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Itgb3bpQ9CQ82 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Itgb3bpQ9CQ82 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Itgb3bpQ9CQ82 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Itgb3bpQ9CQ82 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Itgb3bpQ9CQ82 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Itgb3bpQ9CQ82 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.19■□□□□ 0.98
Itgb3bpQ9CQ82 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Itgb3bpQ9CQ82 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Itgb3bpQ9CQ82 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.18■□□□□ 0.98
Itgb3bpQ9CQ82 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Itgb3bpQ9CQ82 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.18■□□□□ 0.98
Itgb3bpQ9CQ82 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Itgb3bpQ9CQ82 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Itgb3bpQ9CQ82 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.17■□□□□ 0.98
Itgb3bpQ9CQ82 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Itgb3bpQ9CQ82 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.17■□□□□ 0.98
Itgb3bpQ9CQ82 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Itgb3bpQ9CQ82 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Itgb3bpQ9CQ82 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Itgb3bpQ9CQ82 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Itgb3bpQ9CQ82 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.15■□□□□ 0.98
Itgb3bpQ9CQ82 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Itgb3bpQ9CQ82 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Itgb3bpQ9CQ82 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Itgb3bpQ9CQ82 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Itgb3bpQ9CQ82 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Itgb3bpQ9CQ82 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Itgb3bpQ9CQ82 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.14■□□□□ 0.97
Itgb3bpQ9CQ82 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Itgb3bpQ9CQ82 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Itgb3bpQ9CQ82 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Itgb3bpQ9CQ82 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Itgb3bpQ9CQ82 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Itgb3bpQ9CQ82 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Itgb3bpQ9CQ82 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Itgb3bpQ9CQ82 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Itgb3bpQ9CQ82 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Itgb3bpQ9CQ82 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Itgb3bpQ9CQ82 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Itgb3bpQ9CQ82 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Itgb3bpQ9CQ82 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Itgb3bpQ9CQ82 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Itgb3bpQ9CQ82 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Itgb3bpQ9CQ82 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Itgb3bpQ9CQ82 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Itgb3bpQ9CQ82 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Itgb3bpQ9CQ82 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Itgb3bpQ9CQ82 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Itgb3bpQ9CQ82 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Itgb3bpQ9CQ82 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Itgb3bpQ9CQ82 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Itgb3bpQ9CQ82 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms