Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.52■□□□□ 0.72
SHANK2-AS3Q9BTD1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
SHANK2-AS3Q9BTD1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHANK2-AS3Q9BTD1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.51■□□□□ 0.71
SHANK2-AS3Q9BTD1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.51■□□□□ 0.71
SHANK2-AS3Q9BTD1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SHANK2-AS3Q9BTD1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHANK2-AS3Q9BTD1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHANK2-AS3Q9BTD1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.5■□□□□ 0.71
SHANK2-AS3Q9BTD1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHANK2-AS3Q9BTD1 AC005559.1-201ENST00000589661 871 ntBASIC19.5■□□□□ 0.71
SHANK2-AS3Q9BTD1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.5■□□□□ 0.71
SHANK2-AS3Q9BTD1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHANK2-AS3Q9BTD1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.49■□□□□ 0.71
SHANK2-AS3Q9BTD1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHANK2-AS3Q9BTD1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHANK2-AS3Q9BTD1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHANK2-AS3Q9BTD1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHANK2-AS3Q9BTD1 AC135983.2-203ENST00000454486 1613 ntBASIC19.48■□□□□ 0.71
SHANK2-AS3Q9BTD1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHANK2-AS3Q9BTD1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.48■□□□□ 0.71
SHANK2-AS3Q9BTD1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.48■□□□□ 0.71
SHANK2-AS3Q9BTD1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SHANK2-AS3Q9BTD1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SHANK2-AS3Q9BTD1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
SHANK2-AS3Q9BTD1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHANK2-AS3Q9BTD1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHANK2-AS3Q9BTD1 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.46■□□□□ 0.71
SHANK2-AS3Q9BTD1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHANK2-AS3Q9BTD1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHANK2-AS3Q9BTD1 AC108673.1-201ENST00000510422 1159 ntBASIC19.46■□□□□ 0.71
SHANK2-AS3Q9BTD1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHANK2-AS3Q9BTD1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHANK2-AS3Q9BTD1 AC018358.1-201ENST00000631079 1402 ntBASIC19.45■□□□□ 0.7
SHANK2-AS3Q9BTD1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.45■□□□□ 0.7
SHANK2-AS3Q9BTD1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SHANK2-AS3Q9BTD1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.45■□□□□ 0.7
SHANK2-AS3Q9BTD1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.44■□□□□ 0.7
SHANK2-AS3Q9BTD1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHANK2-AS3Q9BTD1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHANK2-AS3Q9BTD1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SHANK2-AS3Q9BTD1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHANK2-AS3Q9BTD1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.43■□□□□ 0.7
SHANK2-AS3Q9BTD1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHANK2-AS3Q9BTD1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.43■□□□□ 0.7
SHANK2-AS3Q9BTD1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHANK2-AS3Q9BTD1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHANK2-AS3Q9BTD1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHANK2-AS3Q9BTD1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHANK2-AS3Q9BTD1 SUZ12P1-203ENST00000578195 985 ntBASIC19.42■□□□□ 0.7
SHANK2-AS3Q9BTD1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.42■□□□□ 0.7
SHANK2-AS3Q9BTD1 WHAMMP2-203ENST00000563942 1603 ntBASIC19.42■□□□□ 0.7
SHANK2-AS3Q9BTD1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.41■□□□□ 0.7
SHANK2-AS3Q9BTD1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SHANK2-AS3Q9BTD1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.41■□□□□ 0.7
SHANK2-AS3Q9BTD1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHANK2-AS3Q9BTD1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHANK2-AS3Q9BTD1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHANK2-AS3Q9BTD1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHANK2-AS3Q9BTD1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHANK2-AS3Q9BTD1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHANK2-AS3Q9BTD1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.4■□□□□ 0.7
SHANK2-AS3Q9BTD1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SHANK2-AS3Q9BTD1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SHANK2-AS3Q9BTD1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHANK2-AS3Q9BTD1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 LINC00273-201ENST00000539813 1452 ntBASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHANK2-AS3Q9BTD1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHANK2-AS3Q9BTD1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SHANK2-AS3Q9BTD1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHANK2-AS3Q9BTD1 MIR6090-201ENST00000622481 60 ntBASIC19.38■□□□□ 0.69
SHANK2-AS3Q9BTD1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHANK2-AS3Q9BTD1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHANK2-AS3Q9BTD1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHANK2-AS3Q9BTD1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.37■□□□□ 0.69
SHANK2-AS3Q9BTD1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHANK2-AS3Q9BTD1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHANK2-AS3Q9BTD1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHANK2-AS3Q9BTD1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHANK2-AS3Q9BTD1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHANK2-AS3Q9BTD1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHANK2-AS3Q9BTD1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHANK2-AS3Q9BTD1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.34■□□□□ 0.69
SHANK2-AS3Q9BTD1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SHANK2-AS3Q9BTD1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SHANK2-AS3Q9BTD1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.34■□□□□ 0.69
SHANK2-AS3Q9BTD1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHANK2-AS3Q9BTD1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SHANK2-AS3Q9BTD1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHANK2-AS3Q9BTD1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.33■□□□□ 0.69
SHANK2-AS3Q9BTD1 DUX4L28-201ENST00000623687 678 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms