Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC14.85□□□□□ -0.03
LIMD2Q9BT23 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC14.85□□□□□ -0.03
LIMD2Q9BT23 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC14.85□□□□□ -0.03
LIMD2Q9BT23 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMD2Q9BT23 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMD2Q9BT23 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC14.84□□□□□ -0.03
LIMD2Q9BT23 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC14.84□□□□□ -0.03
LIMD2Q9BT23 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMD2Q9BT23 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
LIMD2Q9BT23 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMD2Q9BT23 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LIMD2Q9BT23 DUX4L28-201ENST00000623687 678 ntBASIC14.83□□□□□ -0.04
LIMD2Q9BT23 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMD2Q9BT23 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LIMD2Q9BT23 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIMD2Q9BT23 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LIMD2Q9BT23 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMD2Q9BT23 AC044849.2-201ENST00000606596 710 ntBASIC14.82□□□□□ -0.04
LIMD2Q9BT23 AC142086.6-201ENST00000621154 1765 ntBASIC14.82□□□□□ -0.04
LIMD2Q9BT23 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMD2Q9BT23 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMD2Q9BT23 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMD2Q9BT23 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMD2Q9BT23 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMD2Q9BT23 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMD2Q9BT23 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMD2Q9BT23 SHF-207ENST00000560540 2062 ntTSL 5 BASIC14.8□□□□□ -0.04
LIMD2Q9BT23 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMD2Q9BT23 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LIMD2Q9BT23 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC14.8□□□□□ -0.04
LIMD2Q9BT23 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMD2Q9BT23 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMD2Q9BT23 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMD2Q9BT23 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.79□□□□□ -0.04
LIMD2Q9BT23 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMD2Q9BT23 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC14.79□□□□□ -0.04
LIMD2Q9BT23 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMD2Q9BT23 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
LIMD2Q9BT23 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMD2Q9BT23 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMD2Q9BT23 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC14.78□□□□□ -0.04
LIMD2Q9BT23 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.78□□□□□ -0.04
LIMD2Q9BT23 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMD2Q9BT23 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC14.78□□□□□ -0.04
LIMD2Q9BT23 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIMD2Q9BT23 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIMD2Q9BT23 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC14.77□□□□□ -0.04
LIMD2Q9BT23 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMD2Q9BT23 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMD2Q9BT23 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMD2Q9BT23 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMD2Q9BT23 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMD2Q9BT23 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMD2Q9BT23 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMD2Q9BT23 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMD2Q9BT23 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMD2Q9BT23 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LIMD2Q9BT23 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMD2Q9BT23 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMD2Q9BT23 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMD2Q9BT23 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 MEST-211ENST00000437945 1455 ntTSL 5 BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMD2Q9BT23 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIMD2Q9BT23 PROC-203ENST00000409048 1586 ntTSL 5 BASIC14.74□□□□□ -0.05
LIMD2Q9BT23 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIMD2Q9BT23 AL162393.1-201ENST00000437852 946 ntBASIC14.74□□□□□ -0.05
LIMD2Q9BT23 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
LIMD2Q9BT23 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
LIMD2Q9BT23 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIMD2Q9BT23 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIMD2Q9BT23 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIMD2Q9BT23 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 AC087741.3-201ENST00000624270 1347 ntBASIC14.73□□□□□ -0.05
LIMD2Q9BT23 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMD2Q9BT23 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMD2Q9BT23 DRD5P2-201ENST00000421395 2012 ntBASIC14.72□□□□□ -0.05
LIMD2Q9BT23 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMD2Q9BT23 BOD1-206ENST00000480951 814 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms