Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HDHD3Q9BSH5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HDHD3Q9BSH5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HDHD3Q9BSH5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.38■■□□□ 1.01
HDHD3Q9BSH5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.38■■□□□ 1.01
HDHD3Q9BSH5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HDHD3Q9BSH5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HDHD3Q9BSH5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDHD3Q9BSH5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.37■■□□□ 1.01
HDHD3Q9BSH5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.37■■□□□ 1.01
HDHD3Q9BSH5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.36■■□□□ 1.01
HDHD3Q9BSH5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HDHD3Q9BSH5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.36■■□□□ 1.01
HDHD3Q9BSH5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.36■■□□□ 1.01
HDHD3Q9BSH5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.36■■□□□ 1.01
HDHD3Q9BSH5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HDHD3Q9BSH5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HDHD3Q9BSH5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
HDHD3Q9BSH5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HDHD3Q9BSH5 AP002414.2-202ENST00000590929 1450 ntBASIC21.35■■□□□ 1.01
HDHD3Q9BSH5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.35■■□□□ 1.01
HDHD3Q9BSH5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
HDHD3Q9BSH5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.35■■□□□ 1.01
HDHD3Q9BSH5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HDHD3Q9BSH5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HDHD3Q9BSH5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HDHD3Q9BSH5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HDHD3Q9BSH5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HDHD3Q9BSH5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.34■■□□□ 1.01
HDHD3Q9BSH5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HDHD3Q9BSH5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HDHD3Q9BSH5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.33■■□□□ 1.01
HDHD3Q9BSH5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.33■■□□□ 1.01
HDHD3Q9BSH5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.33■■□□□ 1.01
HDHD3Q9BSH5 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.33■■□□□ 1.01
HDHD3Q9BSH5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HDHD3Q9BSH5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.32■■□□□ 1
HDHD3Q9BSH5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDHD3Q9BSH5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.32■■□□□ 1
HDHD3Q9BSH5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
HDHD3Q9BSH5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDHD3Q9BSH5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.32■■□□□ 1
HDHD3Q9BSH5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.32■■□□□ 1
HDHD3Q9BSH5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDHD3Q9BSH5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.31■■□□□ 1
HDHD3Q9BSH5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDHD3Q9BSH5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDHD3Q9BSH5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDHD3Q9BSH5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
HDHD3Q9BSH5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HDHD3Q9BSH5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.29■■□□□ 1
HDHD3Q9BSH5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
HDHD3Q9BSH5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HDHD3Q9BSH5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
HDHD3Q9BSH5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.29■■□□□ 1
HDHD3Q9BSH5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HDHD3Q9BSH5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HDHD3Q9BSH5 AC135983.2-203ENST00000454486 1613 ntBASIC21.28■■□□□ 1
HDHD3Q9BSH5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.27■■□□□ 1
HDHD3Q9BSH5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.27■■□□□ 1
HDHD3Q9BSH5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.27■■□□□ 1
HDHD3Q9BSH5 WHAMMP2-203ENST00000563942 1603 ntBASIC21.26■□□□□ 0.99
HDHD3Q9BSH5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDHD3Q9BSH5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDHD3Q9BSH5 AC005559.1-201ENST00000589661 871 ntBASIC21.26■□□□□ 0.99
HDHD3Q9BSH5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.26■□□□□ 0.99
HDHD3Q9BSH5 SUZ12P1-203ENST00000578195 985 ntBASIC21.25■□□□□ 0.99
HDHD3Q9BSH5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.25■□□□□ 0.99
HDHD3Q9BSH5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDHD3Q9BSH5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDHD3Q9BSH5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.24■□□□□ 0.99
HDHD3Q9BSH5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.24■□□□□ 0.99
HDHD3Q9BSH5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HDHD3Q9BSH5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HDHD3Q9BSH5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
HDHD3Q9BSH5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.23■□□□□ 0.99
HDHD3Q9BSH5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HDHD3Q9BSH5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HDHD3Q9BSH5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDHD3Q9BSH5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HDHD3Q9BSH5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.22■□□□□ 0.99
HDHD3Q9BSH5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.22■□□□□ 0.99
HDHD3Q9BSH5 AL449106.1-201ENST00000608517 1980 ntBASIC21.21■□□□□ 0.99
HDHD3Q9BSH5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HDHD3Q9BSH5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.21■□□□□ 0.99
HDHD3Q9BSH5 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.21■□□□□ 0.99
HDHD3Q9BSH5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HDHD3Q9BSH5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HDHD3Q9BSH5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HDHD3Q9BSH5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HDHD3Q9BSH5 MIR6090-201ENST00000622481 60 ntBASIC21.2■□□□□ 0.98
HDHD3Q9BSH5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
HDHD3Q9BSH5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDHD3Q9BSH5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDHD3Q9BSH5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HDHD3Q9BSH5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDHD3Q9BSH5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDHD3Q9BSH5 AC018358.1-201ENST00000631079 1402 ntBASIC21.2■□□□□ 0.98
HDHD3Q9BSH5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms