Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smim3Q99PE5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smim3Q99PE5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim3Q99PE5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.76■□□□□ 0.75
Smim3Q99PE5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim3Q99PE5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Smim3Q99PE5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smim3Q99PE5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.75■□□□□ 0.75
Smim3Q99PE5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim3Q99PE5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Smim3Q99PE5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim3Q99PE5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Smim3Q99PE5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim3Q99PE5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Smim3Q99PE5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim3Q99PE5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.74■□□□□ 0.75
Smim3Q99PE5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim3Q99PE5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim3Q99PE5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim3Q99PE5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smim3Q99PE5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim3Q99PE5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim3Q99PE5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Smim3Q99PE5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smim3Q99PE5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Smim3Q99PE5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim3Q99PE5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim3Q99PE5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smim3Q99PE5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Smim3Q99PE5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim3Q99PE5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim3Q99PE5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smim3Q99PE5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.71■□□□□ 0.75
Smim3Q99PE5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smim3Q99PE5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Smim3Q99PE5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smim3Q99PE5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smim3Q99PE5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smim3Q99PE5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim3Q99PE5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.7■□□□□ 0.74
Smim3Q99PE5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim3Q99PE5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim3Q99PE5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim3Q99PE5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.69■□□□□ 0.74
Smim3Q99PE5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim3Q99PE5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.69■□□□□ 0.74
Smim3Q99PE5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim3Q99PE5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.69■□□□□ 0.74
Smim3Q99PE5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim3Q99PE5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim3Q99PE5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim3Q99PE5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim3Q99PE5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim3Q99PE5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Smim3Q99PE5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smim3Q99PE5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim3Q99PE5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim3Q99PE5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim3Q99PE5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim3Q99PE5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim3Q99PE5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smim3Q99PE5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim3Q99PE5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smim3Q99PE5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim3Q99PE5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim3Q99PE5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim3Q99PE5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim3Q99PE5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim3Q99PE5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smim3Q99PE5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.66■□□□□ 0.74
Smim3Q99PE5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smim3Q99PE5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.65■□□□□ 0.74
Smim3Q99PE5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim3Q99PE5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smim3Q99PE5 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.65■□□□□ 0.74
Smim3Q99PE5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smim3Q99PE5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smim3Q99PE5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smim3Q99PE5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim3Q99PE5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Smim3Q99PE5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim3Q99PE5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Smim3Q99PE5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim3Q99PE5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Smim3Q99PE5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smim3Q99PE5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim3Q99PE5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smim3Q99PE5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smim3Q99PE5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim3Q99PE5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim3Q99PE5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smim3Q99PE5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smim3Q99PE5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smim3Q99PE5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smim3Q99PE5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smim3Q99PE5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smim3Q99PE5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Smim3Q99PE5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smim3Q99PE5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smim3Q99PE5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms