Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raf1Q99N57 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Raf1Q99N57 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Raf1Q99N57 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Raf1Q99N57 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Raf1Q99N57 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Raf1Q99N57 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Raf1Q99N57 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Raf1Q99N57 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Raf1Q99N57 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Raf1Q99N57 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Raf1Q99N57 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.62■□□□□ 0.89
Raf1Q99N57 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Raf1Q99N57 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Raf1Q99N57 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Raf1Q99N57 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Raf1Q99N57 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Raf1Q99N57 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Raf1Q99N57 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Raf1Q99N57 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raf1Q99N57 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raf1Q99N57 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Raf1Q99N57 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Raf1Q99N57 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Raf1Q99N57 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Raf1Q99N57 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Raf1Q99N57 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Raf1Q99N57 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Raf1Q99N57 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Raf1Q99N57 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Raf1Q99N57 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Raf1Q99N57 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Raf1Q99N57 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raf1Q99N57 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raf1Q99N57 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.57■□□□□ 0.88
Raf1Q99N57 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.57■□□□□ 0.88
Raf1Q99N57 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raf1Q99N57 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Raf1Q99N57 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raf1Q99N57 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.56■□□□□ 0.88
Raf1Q99N57 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Raf1Q99N57 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Raf1Q99N57 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Raf1Q99N57 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Raf1Q99N57 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Raf1Q99N57 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Raf1Q99N57 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Raf1Q99N57 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Raf1Q99N57 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Raf1Q99N57 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.54■□□□□ 0.88
Raf1Q99N57 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Raf1Q99N57 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Raf1Q99N57 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.53■□□□□ 0.88
Raf1Q99N57 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Raf1Q99N57 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.53■□□□□ 0.88
Raf1Q99N57 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Raf1Q99N57 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Raf1Q99N57 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Raf1Q99N57 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Raf1Q99N57 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Raf1Q99N57 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.52■□□□□ 0.88
Raf1Q99N57 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Raf1Q99N57 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.52■□□□□ 0.88
Raf1Q99N57 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Raf1Q99N57 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Raf1Q99N57 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Raf1Q99N57 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Raf1Q99N57 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Raf1Q99N57 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Raf1Q99N57 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Raf1Q99N57 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Raf1Q99N57 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Raf1Q99N57 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.5■□□□□ 0.87
Raf1Q99N57 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Raf1Q99N57 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Raf1Q99N57 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Raf1Q99N57 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Raf1Q99N57 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Raf1Q99N57 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Raf1Q99N57 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.48■□□□□ 0.87
Raf1Q99N57 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Raf1Q99N57 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Raf1Q99N57 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Raf1Q99N57 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Raf1Q99N57 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Raf1Q99N57 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Raf1Q99N57 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Raf1Q99N57 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Raf1Q99N57 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Raf1Q99N57 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Raf1Q99N57 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Raf1Q99N57 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Raf1Q99N57 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.46■□□□□ 0.87
Raf1Q99N57 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Raf1Q99N57 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Raf1Q99N57 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raf1Q99N57 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.45■□□□□ 0.86
Raf1Q99N57 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raf1Q99N57 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raf1Q99N57 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms