Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.39■■□□□ 1.33
Cstf1Q99LC2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Cstf1Q99LC2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cstf1Q99LC2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Cstf1Q99LC2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cstf1Q99LC2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cstf1Q99LC2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cstf1Q99LC2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cstf1Q99LC2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.38■■□□□ 1.33
Cstf1Q99LC2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cstf1Q99LC2 Zxda-201ENSMUST00000117281 2621 ntBASIC23.37■■□□□ 1.33
Cstf1Q99LC2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cstf1Q99LC2 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.36■■□□□ 1.33
Cstf1Q99LC2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cstf1Q99LC2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cstf1Q99LC2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.36■■□□□ 1.33
Cstf1Q99LC2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cstf1Q99LC2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cstf1Q99LC2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cstf1Q99LC2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.35■■□□□ 1.33
Cstf1Q99LC2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cstf1Q99LC2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cstf1Q99LC2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Cstf1Q99LC2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cstf1Q99LC2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Cstf1Q99LC2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.34■■□□□ 1.33
Cstf1Q99LC2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cstf1Q99LC2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cstf1Q99LC2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Cstf1Q99LC2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cstf1Q99LC2 Gm10420-201ENSMUST00000121713 882 ntBASIC23.33■■□□□ 1.33
Cstf1Q99LC2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.33■■□□□ 1.33
Cstf1Q99LC2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cstf1Q99LC2 Gm5921-201ENSMUST00000075898 882 ntBASIC23.33■■□□□ 1.33
Cstf1Q99LC2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cstf1Q99LC2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cstf1Q99LC2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cstf1Q99LC2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cstf1Q99LC2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cstf1Q99LC2 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.31■■□□□ 1.32
Cstf1Q99LC2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cstf1Q99LC2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Cstf1Q99LC2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.3■■□□□ 1.32
Cstf1Q99LC2 Gm15546-201ENSMUST00000122095 826 ntBASIC23.3■■□□□ 1.32
Cstf1Q99LC2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cstf1Q99LC2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Cstf1Q99LC2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cstf1Q99LC2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cstf1Q99LC2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.27■■□□□ 1.32
Cstf1Q99LC2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.27■■□□□ 1.32
Cstf1Q99LC2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cstf1Q99LC2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.26■■□□□ 1.31
Cstf1Q99LC2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Cstf1Q99LC2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cstf1Q99LC2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.25■■□□□ 1.31
Cstf1Q99LC2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.25■■□□□ 1.31
Cstf1Q99LC2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cstf1Q99LC2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cstf1Q99LC2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cstf1Q99LC2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cstf1Q99LC2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cstf1Q99LC2 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.24■■□□□ 1.31
Cstf1Q99LC2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.23■■□□□ 1.31
Cstf1Q99LC2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cstf1Q99LC2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cstf1Q99LC2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Cstf1Q99LC2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Cstf1Q99LC2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cstf1Q99LC2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cstf1Q99LC2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cstf1Q99LC2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.21■■□□□ 1.31
Cstf1Q99LC2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.21■■□□□ 1.31
Cstf1Q99LC2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cstf1Q99LC2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cstf1Q99LC2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cstf1Q99LC2 Gm9812-201ENSMUST00000061934 968 ntBASIC23.2■■□□□ 1.3
Cstf1Q99LC2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cstf1Q99LC2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cstf1Q99LC2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cstf1Q99LC2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.19■■□□□ 1.3
Cstf1Q99LC2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cstf1Q99LC2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.19■■□□□ 1.3
Cstf1Q99LC2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cstf1Q99LC2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Cstf1Q99LC2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cstf1Q99LC2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cstf1Q99LC2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Cstf1Q99LC2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cstf1Q99LC2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cstf1Q99LC2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.17■■□□□ 1.3
Cstf1Q99LC2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Cstf1Q99LC2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cstf1Q99LC2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.16■■□□□ 1.3
Cstf1Q99LC2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cstf1Q99LC2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.15■■□□□ 1.3
Cstf1Q99LC2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cstf1Q99LC2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cstf1Q99LC2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Cstf1Q99LC2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cstf1Q99LC2 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms