Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH15Q96QU1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDH15Q96QU1 AC110285.7-201ENST00000624417 1536 ntBASIC25.23■■□□□ 1.63
PCDH15Q96QU1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PCDH15Q96QU1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH15Q96QU1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
PCDH15Q96QU1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH15Q96QU1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH15Q96QU1 MIR219A2-201ENST00000608502 1504 ntBASIC25.21■■□□□ 1.63
PCDH15Q96QU1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
PCDH15Q96QU1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDH15Q96QU1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH15Q96QU1 TSPY13P-201ENST00000338964 914 ntBASIC25.2■■□□□ 1.62
PCDH15Q96QU1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH15Q96QU1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PCDH15Q96QU1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH15Q96QU1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH15Q96QU1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH15Q96QU1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH15Q96QU1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH15Q96QU1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH15Q96QU1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PCDH15Q96QU1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH15Q96QU1 AC004987.1-201ENST00000428627 508 ntBASIC25.16■■□□□ 1.62
PCDH15Q96QU1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDH15Q96QU1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH15Q96QU1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH15Q96QU1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.16■■□□□ 1.62
PCDH15Q96QU1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PCDH15Q96QU1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PCDH15Q96QU1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH15Q96QU1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDH15Q96QU1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH15Q96QU1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH15Q96QU1 AL157400.5-201ENST00000507624 621 ntBASIC25.14■■□□□ 1.62
PCDH15Q96QU1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH15Q96QU1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.14■■□□□ 1.61
PCDH15Q96QU1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDH15Q96QU1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
PCDH15Q96QU1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH15Q96QU1 RARRES2P1-201ENST00000474487 481 ntBASIC25.13■■□□□ 1.61
PCDH15Q96QU1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH15Q96QU1 AL135925.1-201ENST00000605920 1701 ntBASIC25.12■■□□□ 1.61
PCDH15Q96QU1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
PCDH15Q96QU1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH15Q96QU1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH15Q96QU1 ATP5G2P3-201ENST00000429083 425 ntBASIC25.11■■□□□ 1.61
PCDH15Q96QU1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDH15Q96QU1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH15Q96QU1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH15Q96QU1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDH15Q96QU1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
PCDH15Q96QU1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH15Q96QU1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH15Q96QU1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PCDH15Q96QU1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDH15Q96QU1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
PCDH15Q96QU1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDH15Q96QU1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDH15Q96QU1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.07■■□□□ 1.6
PCDH15Q96QU1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH15Q96QU1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH15Q96QU1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH15Q96QU1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH15Q96QU1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH15Q96QU1 ECEL1P2-201ENST00000461596 1295 ntBASIC25.05■■□□□ 1.6
PCDH15Q96QU1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH15Q96QU1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.05■■□□□ 1.6
PCDH15Q96QU1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDH15Q96QU1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PCDH15Q96QU1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
PCDH15Q96QU1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH15Q96QU1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH15Q96QU1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH15Q96QU1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH15Q96QU1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDH15Q96QU1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDH15Q96QU1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH15Q96QU1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH15Q96QU1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH15Q96QU1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
PCDH15Q96QU1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH15Q96QU1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH15Q96QU1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25■■□□□ 1.59
PCDH15Q96QU1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PCDH15Q96QU1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH15Q96QU1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH15Q96QU1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH15Q96QU1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDH15Q96QU1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDH15Q96QU1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms