Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CNTNAP3BQ96NU0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CNTNAP3BQ96NU0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
CNTNAP3BQ96NU0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CNTNAP3BQ96NU0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.54■■□□□ 1.52
CNTNAP3BQ96NU0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.54■■□□□ 1.52
CNTNAP3BQ96NU0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.54■■□□□ 1.52
CNTNAP3BQ96NU0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.54■■□□□ 1.52
CNTNAP3BQ96NU0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CNTNAP3BQ96NU0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.53■■□□□ 1.52
CNTNAP3BQ96NU0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
CNTNAP3BQ96NU0 LINC00273-201ENST00000539813 1452 ntBASIC24.52■■□□□ 1.52
CNTNAP3BQ96NU0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CNTNAP3BQ96NU0 YBX1P4-201ENST00000392794 808 ntBASIC24.52■■□□□ 1.52
CNTNAP3BQ96NU0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
CNTNAP3BQ96NU0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CNTNAP3BQ96NU0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.5■■□□□ 1.51
CNTNAP3BQ96NU0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.5■■□□□ 1.51
CNTNAP3BQ96NU0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CNTNAP3BQ96NU0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.49■■□□□ 1.51
CNTNAP3BQ96NU0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.49■■□□□ 1.51
CNTNAP3BQ96NU0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.49■■□□□ 1.51
CNTNAP3BQ96NU0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CNTNAP3BQ96NU0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.49■■□□□ 1.51
CNTNAP3BQ96NU0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CNTNAP3BQ96NU0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CNTNAP3BQ96NU0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CNTNAP3BQ96NU0 AC133552.2-201ENST00000619106 1032 ntBASIC24.47■■□□□ 1.51
CNTNAP3BQ96NU0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CNTNAP3BQ96NU0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CNTNAP3BQ96NU0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CNTNAP3BQ96NU0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CNTNAP3BQ96NU0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.45■■□□□ 1.51
CNTNAP3BQ96NU0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.45■■□□□ 1.5
CNTNAP3BQ96NU0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CNTNAP3BQ96NU0 SPCS2P3-201ENST00000500401 656 ntBASIC24.45■■□□□ 1.5
CNTNAP3BQ96NU0 AC103834.1-201ENST00000520383 144 ntBASIC24.45■■□□□ 1.5
CNTNAP3BQ96NU0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CNTNAP3BQ96NU0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CNTNAP3BQ96NU0 AC009831.1-201ENST00000580420 1582 ntBASIC24.44■■□□□ 1.5
CNTNAP3BQ96NU0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.43■■□□□ 1.5
CNTNAP3BQ96NU0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
CNTNAP3BQ96NU0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.43■■□□□ 1.5
CNTNAP3BQ96NU0 AC074183.2-201ENST00000623112 922 ntBASIC24.43■■□□□ 1.5
CNTNAP3BQ96NU0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CNTNAP3BQ96NU0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
CNTNAP3BQ96NU0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
CNTNAP3BQ96NU0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CNTNAP3BQ96NU0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CNTNAP3BQ96NU0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.41■■□□□ 1.5
CNTNAP3BQ96NU0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CNTNAP3BQ96NU0 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.41■■□□□ 1.5
CNTNAP3BQ96NU0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CNTNAP3BQ96NU0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.41■■□□□ 1.5
CNTNAP3BQ96NU0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CNTNAP3BQ96NU0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.4■■□□□ 1.5
CNTNAP3BQ96NU0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CNTNAP3BQ96NU0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.39■■□□□ 1.49
CNTNAP3BQ96NU0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.39■■□□□ 1.49
CNTNAP3BQ96NU0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CNTNAP3BQ96NU0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.39■■□□□ 1.49
CNTNAP3BQ96NU0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CNTNAP3BQ96NU0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CNTNAP3BQ96NU0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CNTNAP3BQ96NU0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CNTNAP3BQ96NU0 AC148477.6-201ENST00000623746 465 ntBASIC24.38■■□□□ 1.49
CNTNAP3BQ96NU0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CNTNAP3BQ96NU0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.37■■□□□ 1.49
CNTNAP3BQ96NU0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.37■■□□□ 1.49
CNTNAP3BQ96NU0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.36■■□□□ 1.49
CNTNAP3BQ96NU0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.36■■□□□ 1.49
CNTNAP3BQ96NU0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CNTNAP3BQ96NU0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CNTNAP3BQ96NU0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.36■■□□□ 1.49
CNTNAP3BQ96NU0 AC007029.1-201ENST00000604183 313 ntBASIC24.36■■□□□ 1.49
CNTNAP3BQ96NU0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
CNTNAP3BQ96NU0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNTNAP3BQ96NU0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.35■■□□□ 1.49
CNTNAP3BQ96NU0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
CNTNAP3BQ96NU0 AL139246.5-201ENST00000606645 996 ntBASIC24.34■■□□□ 1.49
CNTNAP3BQ96NU0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
CNTNAP3BQ96NU0 DUX4L9-201ENST00000449051 1259 ntBASIC24.33■■□□□ 1.49
CNTNAP3BQ96NU0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.33■■□□□ 1.49
CNTNAP3BQ96NU0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.33■■□□□ 1.49
CNTNAP3BQ96NU0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CNTNAP3BQ96NU0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CNTNAP3BQ96NU0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.32■■□□□ 1.48
CNTNAP3BQ96NU0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.31■■□□□ 1.48
CNTNAP3BQ96NU0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CNTNAP3BQ96NU0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CNTNAP3BQ96NU0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CNTNAP3BQ96NU0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CNTNAP3BQ96NU0 AC139795.1-202ENST00000500444 432 ntBASIC24.3■■□□□ 1.48
CNTNAP3BQ96NU0 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.3■■□□□ 1.48
CNTNAP3BQ96NU0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.3■■□□□ 1.48
CNTNAP3BQ96NU0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CNTNAP3BQ96NU0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CNTNAP3BQ96NU0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.29■■□□□ 1.48
CNTNAP3BQ96NU0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CNTNAP3BQ96NU0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms