Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.45■■□□□ 1.67
CFAP54Q96N23 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.45■■□□□ 1.67
CFAP54Q96N23 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFAP54Q96N23 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFAP54Q96N23 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CFAP54Q96N23 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CFAP54Q96N23 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
CFAP54Q96N23 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CFAP54Q96N23 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
CFAP54Q96N23 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CFAP54Q96N23 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.43■■□□□ 1.66
CFAP54Q96N23 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
CFAP54Q96N23 MIR638-201ENST00000385237 100 ntBASIC25.42■■□□□ 1.66
CFAP54Q96N23 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP54Q96N23 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CFAP54Q96N23 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP54Q96N23 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP54Q96N23 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.4■■□□□ 1.66
CFAP54Q96N23 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.4■■□□□ 1.66
CFAP54Q96N23 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.4■■□□□ 1.66
CFAP54Q96N23 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CFAP54Q96N23 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.39■■□□□ 1.66
CFAP54Q96N23 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CFAP54Q96N23 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP54Q96N23 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP54Q96N23 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CFAP54Q96N23 AC008406.3-201ENST00000620001 1374 ntBASIC25.37■■□□□ 1.65
CFAP54Q96N23 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CFAP54Q96N23 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP54Q96N23 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CFAP54Q96N23 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP54Q96N23 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.36■■□□□ 1.65
CFAP54Q96N23 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.36■■□□□ 1.65
CFAP54Q96N23 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CFAP54Q96N23 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP54Q96N23 AC092666.2-201ENST00000613287 246 ntBASIC25.35■■□□□ 1.65
CFAP54Q96N23 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP54Q96N23 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP54Q96N23 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.33■■□□□ 1.65
CFAP54Q96N23 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
CFAP54Q96N23 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.64
CFAP54Q96N23 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
CFAP54Q96N23 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.32■■□□□ 1.64
CFAP54Q96N23 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP54Q96N23 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CFAP54Q96N23 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP54Q96N23 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.31■■□□□ 1.64
CFAP54Q96N23 AC010980.1-201ENST00000587192 1142 ntBASIC25.31■■□□□ 1.64
CFAP54Q96N23 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.31■■□□□ 1.64
CFAP54Q96N23 AC148477.6-201ENST00000623746 465 ntBASIC25.31■■□□□ 1.64
CFAP54Q96N23 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP54Q96N23 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
CFAP54Q96N23 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CFAP54Q96N23 DUX4L9-201ENST00000449051 1259 ntBASIC25.29■■□□□ 1.64
CFAP54Q96N23 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.29■■□□□ 1.64
CFAP54Q96N23 AC103834.1-201ENST00000520383 144 ntBASIC25.28■■□□□ 1.64
CFAP54Q96N23 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.28■■□□□ 1.64
CFAP54Q96N23 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CFAP54Q96N23 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.28■■□□□ 1.64
CFAP54Q96N23 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CFAP54Q96N23 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CFAP54Q96N23 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
CFAP54Q96N23 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CFAP54Q96N23 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.27■■□□□ 1.64
CFAP54Q96N23 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP54Q96N23 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.26■■□□□ 1.63
CFAP54Q96N23 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.26■■□□□ 1.63
CFAP54Q96N23 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP54Q96N23 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.26■■□□□ 1.63
CFAP54Q96N23 SPCS2P3-201ENST00000500401 656 ntBASIC25.26■■□□□ 1.63
CFAP54Q96N23 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP54Q96N23 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CFAP54Q96N23 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CFAP54Q96N23 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CFAP54Q96N23 AC007029.1-201ENST00000604183 313 ntBASIC25.24■■□□□ 1.63
CFAP54Q96N23 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP54Q96N23 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP54Q96N23 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.24■■□□□ 1.63
CFAP54Q96N23 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.24■■□□□ 1.63
CFAP54Q96N23 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP54Q96N23 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP54Q96N23 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP54Q96N23 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.23■■□□□ 1.63
CFAP54Q96N23 AC009831.1-201ENST00000580420 1582 ntBASIC25.22■■□□□ 1.63
CFAP54Q96N23 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.22■■□□□ 1.63
CFAP54Q96N23 BHLHE23-202ENST00000612929 1109 ntBASIC25.22■■□□□ 1.63
CFAP54Q96N23 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CFAP54Q96N23 AL592293.1-201ENST00000502889 1188 ntBASIC25.21■■□□□ 1.63
CFAP54Q96N23 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.21■■□□□ 1.63
CFAP54Q96N23 MIR219A2-201ENST00000608502 1504 ntBASIC25.21■■□□□ 1.63
CFAP54Q96N23 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CFAP54Q96N23 ECEL1P2-201ENST00000461596 1295 ntBASIC25.21■■□□□ 1.63
CFAP54Q96N23 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CFAP54Q96N23 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CFAP54Q96N23 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CFAP54Q96N23 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CFAP54Q96N23 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.2■■□□□ 1.62
CFAP54Q96N23 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CFAP54Q96N23 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.19■■□□□ 1.62
CFAP54Q96N23 AL157400.5-201ENST00000507624 621 ntBASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms