Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.3■■□□□ 1.8
PRICKLE1Q96MT3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRICKLE1Q96MT3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRICKLE1Q96MT3 ABCB10P3-201ENST00000561950 2166 ntBASIC26.29■■□□□ 1.8
PRICKLE1Q96MT3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.29■■□□□ 1.8
PRICKLE1Q96MT3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.29■■□□□ 1.8
PRICKLE1Q96MT3 AC139426.1-201ENST00000568218 2529 ntBASIC26.29■■□□□ 1.8
PRICKLE1Q96MT3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRICKLE1Q96MT3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRICKLE1Q96MT3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PRICKLE1Q96MT3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
PRICKLE1Q96MT3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.27■■□□□ 1.8
PRICKLE1Q96MT3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRICKLE1Q96MT3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRICKLE1Q96MT3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.27■■□□□ 1.8
PRICKLE1Q96MT3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PRICKLE1Q96MT3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.26■■□□□ 1.79
PRICKLE1Q96MT3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRICKLE1Q96MT3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PRICKLE1Q96MT3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.26■■□□□ 1.79
PRICKLE1Q96MT3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.26■■□□□ 1.79
PRICKLE1Q96MT3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRICKLE1Q96MT3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PRICKLE1Q96MT3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
PRICKLE1Q96MT3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.25■■□□□ 1.79
PRICKLE1Q96MT3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.25■■□□□ 1.79
PRICKLE1Q96MT3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PRICKLE1Q96MT3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRICKLE1Q96MT3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.25■■□□□ 1.79
PRICKLE1Q96MT3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PRICKLE1Q96MT3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
PRICKLE1Q96MT3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRICKLE1Q96MT3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
PRICKLE1Q96MT3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PRICKLE1Q96MT3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PRICKLE1Q96MT3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PRICKLE1Q96MT3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
PRICKLE1Q96MT3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRICKLE1Q96MT3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRICKLE1Q96MT3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRICKLE1Q96MT3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRICKLE1Q96MT3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRICKLE1Q96MT3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRICKLE1Q96MT3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.22■■□□□ 1.79
PRICKLE1Q96MT3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
PRICKLE1Q96MT3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PRICKLE1Q96MT3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PRICKLE1Q96MT3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PRICKLE1Q96MT3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PRICKLE1Q96MT3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PRICKLE1Q96MT3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.19■■□□□ 1.78
PRICKLE1Q96MT3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
PRICKLE1Q96MT3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PRICKLE1Q96MT3 AC008813.1-201ENST00000536597 885 ntBASIC26.19■■□□□ 1.78
PRICKLE1Q96MT3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
PRICKLE1Q96MT3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
PRICKLE1Q96MT3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.18■■□□□ 1.78
PRICKLE1Q96MT3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.18■■□□□ 1.78
PRICKLE1Q96MT3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
PRICKLE1Q96MT3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PRICKLE1Q96MT3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.17■■□□□ 1.78
PRICKLE1Q96MT3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.17■■□□□ 1.78
PRICKLE1Q96MT3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PRICKLE1Q96MT3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PRICKLE1Q96MT3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PRICKLE1Q96MT3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PRICKLE1Q96MT3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PRICKLE1Q96MT3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.14■■□□□ 1.78
PRICKLE1Q96MT3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.14■■□□□ 1.77
PRICKLE1Q96MT3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.14■■□□□ 1.77
PRICKLE1Q96MT3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PRICKLE1Q96MT3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PRICKLE1Q96MT3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.13■■□□□ 1.77
PRICKLE1Q96MT3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.13■■□□□ 1.77
PRICKLE1Q96MT3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
PRICKLE1Q96MT3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.12■■□□□ 1.77
PRICKLE1Q96MT3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.12■■□□□ 1.77
PRICKLE1Q96MT3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.12■■□□□ 1.77
PRICKLE1Q96MT3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.11■■□□□ 1.77
PRICKLE1Q96MT3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRICKLE1Q96MT3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
PRICKLE1Q96MT3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
PRICKLE1Q96MT3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PRICKLE1Q96MT3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PRICKLE1Q96MT3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.11■■□□□ 1.77
PRICKLE1Q96MT3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.1■■□□□ 1.77
PRICKLE1Q96MT3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.1■■□□□ 1.77
PRICKLE1Q96MT3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
PRICKLE1Q96MT3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PRICKLE1Q96MT3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.09■■□□□ 1.77
PRICKLE1Q96MT3 AC148477.6-201ENST00000623746 465 ntBASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms