Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPG11Q96JI7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
SPG11Q96JI7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.92■■□□□ 1.1
SPG11Q96JI7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SPG11Q96JI7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPG11Q96JI7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.91■■□□□ 1.1
SPG11Q96JI7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPG11Q96JI7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPG11Q96JI7 MIR935-201ENST00000401179 91 ntBASIC21.9■■□□□ 1.1
SPG11Q96JI7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPG11Q96JI7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.89■■□□□ 1.09
SPG11Q96JI7 AC129492.7-201ENST00000622992 756 ntBASIC21.89■■□□□ 1.09
SPG11Q96JI7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SPG11Q96JI7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPG11Q96JI7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SPG11Q96JI7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SPG11Q96JI7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SPG11Q96JI7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.87■■□□□ 1.09
SPG11Q96JI7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SPG11Q96JI7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPG11Q96JI7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPG11Q96JI7 AC127502.1-201ENST00000399971 1502 ntBASIC21.86■■□□□ 1.09
SPG11Q96JI7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SPG11Q96JI7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPG11Q96JI7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SPG11Q96JI7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.85■■□□□ 1.09
SPG11Q96JI7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPG11Q96JI7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SPG11Q96JI7 AC110285.7-201ENST00000624417 1536 ntBASIC21.83■■□□□ 1.09
SPG11Q96JI7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SPG11Q96JI7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPG11Q96JI7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPG11Q96JI7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.82■■□□□ 1.08
SPG11Q96JI7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.82■■□□□ 1.08
SPG11Q96JI7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPG11Q96JI7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
SPG11Q96JI7 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.81■■□□□ 1.08
SPG11Q96JI7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SPG11Q96JI7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPG11Q96JI7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SPG11Q96JI7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPG11Q96JI7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPG11Q96JI7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.8■■□□□ 1.08
SPG11Q96JI7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.79■■□□□ 1.08
SPG11Q96JI7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.79■■□□□ 1.08
SPG11Q96JI7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.79■■□□□ 1.08
SPG11Q96JI7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
SPG11Q96JI7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPG11Q96JI7 ECEL1P2-201ENST00000461596 1295 ntBASIC21.78■■□□□ 1.08
SPG11Q96JI7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.78■■□□□ 1.08
SPG11Q96JI7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
SPG11Q96JI7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.78■■□□□ 1.08
SPG11Q96JI7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.78■■□□□ 1.08
SPG11Q96JI7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SPG11Q96JI7 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.78■■□□□ 1.08
SPG11Q96JI7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPG11Q96JI7 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.78■■□□□ 1.08
SPG11Q96JI7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPG11Q96JI7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPG11Q96JI7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPG11Q96JI7 AC133552.2-201ENST00000619106 1032 ntBASIC21.76■■□□□ 1.07
SPG11Q96JI7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPG11Q96JI7 DUX4L18-201ENST00000553347 1267 ntBASIC21.75■■□□□ 1.07
SPG11Q96JI7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPG11Q96JI7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPG11Q96JI7 AL157400.5-201ENST00000507624 621 ntBASIC21.74■■□□□ 1.07
SPG11Q96JI7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.74■■□□□ 1.07
SPG11Q96JI7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SPG11Q96JI7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SPG11Q96JI7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.74■■□□□ 1.07
SPG11Q96JI7 AC009299.2-201ENST00000482477 511 ntBASIC21.74■■□□□ 1.07
SPG11Q96JI7 AC131212.1-201ENST00000613771 668 ntBASIC21.74■■□□□ 1.07
SPG11Q96JI7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.74■■□□□ 1.07
SPG11Q96JI7 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.73■■□□□ 1.07
SPG11Q96JI7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SPG11Q96JI7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPG11Q96JI7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SPG11Q96JI7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SPG11Q96JI7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SPG11Q96JI7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SPG11Q96JI7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPG11Q96JI7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.72■■□□□ 1.07
SPG11Q96JI7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPG11Q96JI7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.71■■□□□ 1.07
SPG11Q96JI7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SPG11Q96JI7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPG11Q96JI7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPG11Q96JI7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SPG11Q96JI7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPG11Q96JI7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
SPG11Q96JI7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPG11Q96JI7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.7■■□□□ 1.06
SPG11Q96JI7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SPG11Q96JI7 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.69■■□□□ 1.06
SPG11Q96JI7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPG11Q96JI7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPG11Q96JI7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPG11Q96JI7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.68■■□□□ 1.06
SPG11Q96JI7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPG11Q96JI7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms