Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF183Q96D59 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF183Q96D59 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RNF183Q96D59 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF183Q96D59 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 AC008813.1-201ENST00000536597 885 ntBASIC18.62■□□□□ 0.57
RNF183Q96D59 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF183Q96D59 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF183Q96D59 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF183Q96D59 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF183Q96D59 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF183Q96D59 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF183Q96D59 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF183Q96D59 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF183Q96D59 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF183Q96D59 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.6■□□□□ 0.57
RNF183Q96D59 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF183Q96D59 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF183Q96D59 AC110285.7-201ENST00000624417 1536 ntBASIC18.59■□□□□ 0.57
RNF183Q96D59 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
RNF183Q96D59 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF183Q96D59 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF183Q96D59 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF183Q96D59 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF183Q96D59 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF183Q96D59 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RNF183Q96D59 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF183Q96D59 HSD17B1P1-201ENST00000590052 955 ntBASIC18.58■□□□□ 0.56
RNF183Q96D59 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNF183Q96D59 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF183Q96D59 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF183Q96D59 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF183Q96D59 AP004833.2-201ENST00000532228 1454 ntBASIC18.58■□□□□ 0.56
RNF183Q96D59 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF183Q96D59 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF183Q96D59 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF183Q96D59 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF183Q96D59 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF183Q96D59 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF183Q96D59 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF183Q96D59 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF183Q96D59 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF183Q96D59 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF183Q96D59 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RNF183Q96D59 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF183Q96D59 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF183Q96D59 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF183Q96D59 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF183Q96D59 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF183Q96D59 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF183Q96D59 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF183Q96D59 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF183Q96D59 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF183Q96D59 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF183Q96D59 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF183Q96D59 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF183Q96D59 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
RNF183Q96D59 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF183Q96D59 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF183Q96D59 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF183Q96D59 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF183Q96D59 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF183Q96D59 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RNF183Q96D59 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF183Q96D59 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF183Q96D59 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF183Q96D59 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF183Q96D59 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF183Q96D59 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF183Q96D59 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF183Q96D59 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF183Q96D59 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF183Q96D59 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF183Q96D59 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF183Q96D59 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF183Q96D59 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RNF183Q96D59 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF183Q96D59 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms