Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.79■■□□□ 1.24
HPS1Q92902 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HPS1Q92902 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.79■■□□□ 1.24
HPS1Q92902 DUX4L28-201ENST00000623687 678 ntBASIC22.79■■□□□ 1.24
HPS1Q92902 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
HPS1Q92902 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.78■■□□□ 1.24
HPS1Q92902 DRD5P2-201ENST00000421395 2012 ntBASIC22.78■■□□□ 1.24
HPS1Q92902 AC044849.2-201ENST00000606596 710 ntBASIC22.78■■□□□ 1.24
HPS1Q92902 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.78■■□□□ 1.24
HPS1Q92902 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.77■■□□□ 1.24
HPS1Q92902 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.77■■□□□ 1.24
HPS1Q92902 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HPS1Q92902 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
HPS1Q92902 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
HPS1Q92902 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.76■■□□□ 1.23
HPS1Q92902 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HPS1Q92902 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.76■■□□□ 1.23
HPS1Q92902 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HPS1Q92902 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HPS1Q92902 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.75■■□□□ 1.23
HPS1Q92902 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
HPS1Q92902 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.74■■□□□ 1.23
HPS1Q92902 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HPS1Q92902 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.74■■□□□ 1.23
HPS1Q92902 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HPS1Q92902 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HPS1Q92902 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.73■■□□□ 1.23
HPS1Q92902 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.73■■□□□ 1.23
HPS1Q92902 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HPS1Q92902 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HPS1Q92902 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
HPS1Q92902 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.72■■□□□ 1.23
HPS1Q92902 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HPS1Q92902 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
HPS1Q92902 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HPS1Q92902 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HPS1Q92902 AC093323.1-202ENST00000635031 2045 ntBASIC22.71■■□□□ 1.23
HPS1Q92902 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HPS1Q92902 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HPS1Q92902 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
HPS1Q92902 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HPS1Q92902 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HPS1Q92902 ABHD17AP4-201ENST00000411545 909 ntBASIC22.68■■□□□ 1.22
HPS1Q92902 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HPS1Q92902 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.67■■□□□ 1.22
HPS1Q92902 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HPS1Q92902 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.67■■□□□ 1.22
HPS1Q92902 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.67■■□□□ 1.22
HPS1Q92902 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
HPS1Q92902 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
HPS1Q92902 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HPS1Q92902 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
HPS1Q92902 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HPS1Q92902 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HPS1Q92902 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HPS1Q92902 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HPS1Q92902 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.64■■□□□ 1.21
HPS1Q92902 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HPS1Q92902 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HPS1Q92902 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HPS1Q92902 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HPS1Q92902 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
HPS1Q92902 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
HPS1Q92902 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
HPS1Q92902 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HPS1Q92902 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HPS1Q92902 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
HPS1Q92902 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.61■■□□□ 1.21
HPS1Q92902 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HPS1Q92902 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HPS1Q92902 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HPS1Q92902 MIR7108-201ENST00000614319 87 ntBASIC22.61■■□□□ 1.21
HPS1Q92902 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
HPS1Q92902 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HPS1Q92902 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HPS1Q92902 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HPS1Q92902 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HPS1Q92902 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
HPS1Q92902 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
HPS1Q92902 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
HPS1Q92902 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HPS1Q92902 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HPS1Q92902 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.58■■□□□ 1.21
HPS1Q92902 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.58■■□□□ 1.2
HPS1Q92902 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
HPS1Q92902 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HPS1Q92902 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.57■■□□□ 1.2
HPS1Q92902 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.57■■□□□ 1.2
HPS1Q92902 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
HPS1Q92902 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
HPS1Q92902 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HPS1Q92902 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HPS1Q92902 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HPS1Q92902 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HPS1Q92902 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HPS1Q92902 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.55■■□□□ 1.2
HPS1Q92902 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.55■■□□□ 1.2
HPS1Q92902 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HPS1Q92902 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HPS1Q92902 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms