Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
RTF1Q92541 PEX7-203ENST00000541292 945 ntTSL 5 BASIC33.41■■■□□ 2.94
RTF1Q92541 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC33.41■■■□□ 2.94
RTF1Q92541 AL139393.2-201ENST00000608721 2025 ntBASIC33.41■■■□□ 2.94
RTF1Q92541 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC33.4■■■□□ 2.94
RTF1Q92541 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC33.4■■■□□ 2.94
RTF1Q92541 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
RTF1Q92541 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC33.39■■■□□ 2.94
RTF1Q92541 RPS2-210ENST00000530225 765 ntTSL 2 BASIC33.39■■■□□ 2.94
RTF1Q92541 AC100797.4-201ENST00000631653 1827 ntBASIC33.39■■■□□ 2.94
RTF1Q92541 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
RTF1Q92541 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
RTF1Q92541 CHST11-203ENST00000547956 936 ntTSL 2 BASIC33.38■■■□□ 2.93
RTF1Q92541 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC33.38■■■□□ 2.93
RTF1Q92541 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
RTF1Q92541 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
RTF1Q92541 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
RTF1Q92541 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC33.37■■■□□ 2.93
RTF1Q92541 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
RTF1Q92541 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
RTF1Q92541 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
RTF1Q92541 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
RTF1Q92541 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
RTF1Q92541 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.36■■■□□ 2.93
RTF1Q92541 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
RTF1Q92541 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC33.35■■■□□ 2.93
RTF1Q92541 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
RTF1Q92541 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
RTF1Q92541 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
RTF1Q92541 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
RTF1Q92541 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
RTF1Q92541 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC33.34■■■□□ 2.93
RTF1Q92541 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC33.34■■■□□ 2.93
RTF1Q92541 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC33.33■■■□□ 2.93
RTF1Q92541 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC33.33■■■□□ 2.93
RTF1Q92541 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC33.33■■■□□ 2.93
RTF1Q92541 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
RTF1Q92541 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC33.32■■■□□ 2.92
RTF1Q92541 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC33.32■■■□□ 2.92
RTF1Q92541 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC33.32■■■□□ 2.92
RTF1Q92541 AC148477.6-201ENST00000623746 465 ntBASIC33.32■■■□□ 2.92
RTF1Q92541 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC33.31■■■□□ 2.92
RTF1Q92541 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC33.3■■■□□ 2.92
RTF1Q92541 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC33.3■■■□□ 2.92
RTF1Q92541 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
RTF1Q92541 GPX1-201ENST00000419349 1106 ntBASIC33.29■■■□□ 2.92
RTF1Q92541 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
RTF1Q92541 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
RTF1Q92541 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
RTF1Q92541 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
RTF1Q92541 CEP120-209ENST00000515110 606 ntTSL 3 BASIC33.28■■■□□ 2.92
RTF1Q92541 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
RTF1Q92541 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
RTF1Q92541 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
RTF1Q92541 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
RTF1Q92541 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC33.27■■■□□ 2.92
RTF1Q92541 ABCB10P3-201ENST00000561950 2166 ntBASIC33.26■■■□□ 2.91
RTF1Q92541 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC33.25■■■□□ 2.91
RTF1Q92541 MIR219A2-201ENST00000608502 1504 ntBASIC33.25■■■□□ 2.91
RTF1Q92541 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC33.25■■■□□ 2.91
RTF1Q92541 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC33.25■■■□□ 2.91
RTF1Q92541 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC33.24■■■□□ 2.91
RTF1Q92541 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
RTF1Q92541 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
RTF1Q92541 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
RTF1Q92541 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
RTF1Q92541 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
RTF1Q92541 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.22■■■□□ 2.91
RTF1Q92541 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
RTF1Q92541 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
RTF1Q92541 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC33.21■■■□□ 2.91
RTF1Q92541 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC33.21■■■□□ 2.91
RTF1Q92541 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
RTF1Q92541 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
RTF1Q92541 AC022413.1-201ENST00000624602 984 ntBASIC33.21■■■□□ 2.91
RTF1Q92541 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC33.2■■■□□ 2.91
RTF1Q92541 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
RTF1Q92541 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC33.18■■■□□ 2.9
RTF1Q92541 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
RTF1Q92541 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC33.17■■■□□ 2.9
RTF1Q92541 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC33.17■■■□□ 2.9
RTF1Q92541 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
RTF1Q92541 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC33.16■■■□□ 2.9
RTF1Q92541 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
RTF1Q92541 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
RTF1Q92541 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
RTF1Q92541 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC33.15■■■□□ 2.9
RTF1Q92541 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RTF1Q92541 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
RTF1Q92541 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
RTF1Q92541 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RTF1Q92541 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC33.14■■■□□ 2.9
RTF1Q92541 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RTF1Q92541 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RTF1Q92541 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
RTF1Q92541 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
RTF1Q92541 RNF126P1-201ENST00000567452 1320 ntBASIC33.13■■■□□ 2.89
RTF1Q92541 RARRES2P2-201ENST00000394842 485 ntBASIC33.13■■■□□ 2.89
RTF1Q92541 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC33.13■■■□□ 2.89
RTF1Q92541 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC33.12■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms