Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhgb2Q91XX7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgb2Q91XX7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhgb2Q91XX7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcdhgb2Q91XX7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdhgb2Q91XX7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb2Q91XX7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb2Q91XX7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhgb2Q91XX7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.76■■□□□ 1.07
Pcdhgb2Q91XX7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb2Q91XX7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb2Q91XX7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb2Q91XX7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhgb2Q91XX7 Zfp131-205ENSMUST00000223812 663 ntBASIC21.74■■□□□ 1.07
Pcdhgb2Q91XX7 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.74■■□□□ 1.07
Pcdhgb2Q91XX7 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.74■■□□□ 1.07
Pcdhgb2Q91XX7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb2Q91XX7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb2Q91XX7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb2Q91XX7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhgb2Q91XX7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb2Q91XX7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.73■■□□□ 1.07
Pcdhgb2Q91XX7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb2Q91XX7 Particl-201ENSMUST00000205370 1560 ntBASIC21.73■■□□□ 1.07
Pcdhgb2Q91XX7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb2Q91XX7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb2Q91XX7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb2Q91XX7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb2Q91XX7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdhgb2Q91XX7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb2Q91XX7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb2Q91XX7 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.69■■□□□ 1.06
Pcdhgb2Q91XX7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdhgb2Q91XX7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhgb2Q91XX7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb2Q91XX7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb2Q91XX7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pcdhgb2Q91XX7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb2Q91XX7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb2Q91XX7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb2Q91XX7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb2Q91XX7 Gm24970-201ENSMUST00000175582 82 ntBASIC21.67■■□□□ 1.06
Pcdhgb2Q91XX7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhgb2Q91XX7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb2Q91XX7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Pcdhgb2Q91XX7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb2Q91XX7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.64■■□□□ 1.06
Pcdhgb2Q91XX7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Pcdhgb2Q91XX7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb2Q91XX7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb2Q91XX7 Gm30023-201ENSMUST00000197970 889 ntBASIC21.64■■□□□ 1.05
Pcdhgb2Q91XX7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb2Q91XX7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhgb2Q91XX7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb2Q91XX7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb2Q91XX7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhgb2Q91XX7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhgb2Q91XX7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb2Q91XX7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb2Q91XX7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb2Q91XX7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb2Q91XX7 Gm9397-201ENSMUST00000200125 605 ntBASIC21.62■■□□□ 1.05
Pcdhgb2Q91XX7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdhgb2Q91XX7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb2Q91XX7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhgb2Q91XX7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhgb2Q91XX7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhgb2Q91XX7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhgb2Q91XX7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhgb2Q91XX7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
Pcdhgb2Q91XX7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhgb2Q91XX7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb2Q91XX7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb2Q91XX7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb2Q91XX7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb2Q91XX7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb2Q91XX7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb2Q91XX7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb2Q91XX7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb2Q91XX7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.58■■□□□ 1.05
Pcdhgb2Q91XX7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.58■■□□□ 1.04
Pcdhgb2Q91XX7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgb2Q91XX7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Pcdhgb2Q91XX7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb2Q91XX7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb2Q91XX7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb2Q91XX7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb2Q91XX7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhgb2Q91XX7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb2Q91XX7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb2Q91XX7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb2Q91XX7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb2Q91XX7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb2Q91XX7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhgb2Q91XX7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdhgb2Q91XX7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhgb2Q91XX7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb2Q91XX7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb2Q91XX7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb2Q91XX7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms