Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx41Q91VN6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.59■■□□□ 1.85
Ddx41Q91VN6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx41Q91VN6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx41Q91VN6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Ddx41Q91VN6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx41Q91VN6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx41Q91VN6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx41Q91VN6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx41Q91VN6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.56■■□□□ 1.84
Ddx41Q91VN6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx41Q91VN6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx41Q91VN6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx41Q91VN6 Gm6311-201ENSMUST00000073790 878 ntBASIC26.54■■□□□ 1.84
Ddx41Q91VN6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Ddx41Q91VN6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Ddx41Q91VN6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx41Q91VN6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx41Q91VN6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
Ddx41Q91VN6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx41Q91VN6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx41Q91VN6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Ddx41Q91VN6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.51■■□□□ 1.84
Ddx41Q91VN6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
Ddx41Q91VN6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.51■■□□□ 1.83
Ddx41Q91VN6 Mir6538-201ENSMUST00000183713 110 ntBASIC26.51■■□□□ 1.83
Ddx41Q91VN6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx41Q91VN6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Ddx41Q91VN6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.49■■□□□ 1.83
Ddx41Q91VN6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx41Q91VN6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.48■■□□□ 1.83
Ddx41Q91VN6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx41Q91VN6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
Ddx41Q91VN6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx41Q91VN6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx41Q91VN6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx41Q91VN6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx41Q91VN6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.45■■□□□ 1.83
Ddx41Q91VN6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ddx41Q91VN6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ddx41Q91VN6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Ddx41Q91VN6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ddx41Q91VN6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.43■■□□□ 1.82
Ddx41Q91VN6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Ddx41Q91VN6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx41Q91VN6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx41Q91VN6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.4■■□□□ 1.82
Ddx41Q91VN6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Ddx41Q91VN6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx41Q91VN6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx41Q91VN6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ddx41Q91VN6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ddx41Q91VN6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ddx41Q91VN6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Ddx41Q91VN6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Ddx41Q91VN6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.39■■□□□ 1.82
Ddx41Q91VN6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ddx41Q91VN6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.38■■□□□ 1.81
Ddx41Q91VN6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx41Q91VN6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx41Q91VN6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx41Q91VN6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ddx41Q91VN6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx41Q91VN6 Gm37136-201ENSMUST00000194368 194 ntBASIC26.35■■□□□ 1.81
Ddx41Q91VN6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ddx41Q91VN6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ddx41Q91VN6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx41Q91VN6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx41Q91VN6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx41Q91VN6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx41Q91VN6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx41Q91VN6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx41Q91VN6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx41Q91VN6 Gm4799-201ENSMUST00000095396 657 ntBASIC26.31■■□□□ 1.8
Ddx41Q91VN6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx41Q91VN6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx41Q91VN6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Ddx41Q91VN6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx41Q91VN6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
Ddx41Q91VN6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Ddx41Q91VN6 Cap2-205ENSMUST00000225824 1634 ntBASIC26.28■■□□□ 1.8
Ddx41Q91VN6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
Ddx41Q91VN6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ddx41Q91VN6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ddx41Q91VN6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Ddx41Q91VN6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.27■■□□□ 1.8
Ddx41Q91VN6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ddx41Q91VN6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ddx41Q91VN6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx41Q91VN6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx41Q91VN6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx41Q91VN6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx41Q91VN6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx41Q91VN6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx41Q91VN6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx41Q91VN6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.24■■□□□ 1.79
Ddx41Q91VN6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.24■■□□□ 1.79
Ddx41Q91VN6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Ddx41Q91VN6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx41Q91VN6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.23■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms