Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCD2Q8WV60 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PTCD2Q8WV60 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.7■■□□□ 1.7
PTCD2Q8WV60 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.7■■□□□ 1.7
PTCD2Q8WV60 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
PTCD2Q8WV60 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.7■■□□□ 1.7
PTCD2Q8WV60 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
PTCD2Q8WV60 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PTCD2Q8WV60 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.69■■□□□ 1.7
PTCD2Q8WV60 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.69■■□□□ 1.7
PTCD2Q8WV60 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PTCD2Q8WV60 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PTCD2Q8WV60 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTCD2Q8WV60 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
PTCD2Q8WV60 BX255925.1-201ENST00000566954 1854 ntBASIC25.68■■□□□ 1.7
PTCD2Q8WV60 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTCD2Q8WV60 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.67■■□□□ 1.7
PTCD2Q8WV60 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PTCD2Q8WV60 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PTCD2Q8WV60 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.67■■□□□ 1.7
PTCD2Q8WV60 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PTCD2Q8WV60 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.67■■□□□ 1.7
PTCD2Q8WV60 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.67■■□□□ 1.7
PTCD2Q8WV60 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.67■■□□□ 1.7
PTCD2Q8WV60 DUX4L11-201ENST00000611504 1267 ntBASIC25.67■■□□□ 1.7
PTCD2Q8WV60 DUX4L12-201ENST00000614593 1267 ntBASIC25.67■■□□□ 1.7
PTCD2Q8WV60 LINC01971-201ENST00000617888 1048 ntBASIC25.67■■□□□ 1.7
PTCD2Q8WV60 DUX4L14-201ENST00000621227 1267 ntBASIC25.67■■□□□ 1.7
PTCD2Q8WV60 AP002414.2-202ENST00000590929 1450 ntBASIC25.66■■□□□ 1.7
PTCD2Q8WV60 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.66■■□□□ 1.7
PTCD2Q8WV60 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTCD2Q8WV60 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCD2Q8WV60 HLA-V-202ENST00000446817 847 ntBASIC25.65■■□□□ 1.7
PTCD2Q8WV60 WHAMMP2-203ENST00000563942 1603 ntBASIC25.65■■□□□ 1.7
PTCD2Q8WV60 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PTCD2Q8WV60 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.64■■□□□ 1.7
PTCD2Q8WV60 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PTCD2Q8WV60 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PTCD2Q8WV60 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.63■■□□□ 1.69
PTCD2Q8WV60 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.62■■□□□ 1.69
PTCD2Q8WV60 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTCD2Q8WV60 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTCD2Q8WV60 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTCD2Q8WV60 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD2Q8WV60 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
PTCD2Q8WV60 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD2Q8WV60 CR559946.2-201ENST00000623684 991 ntBASIC25.61■■□□□ 1.69
PTCD2Q8WV60 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.61■■□□□ 1.69
PTCD2Q8WV60 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD2Q8WV60 LINC01003-201ENST00000564834 1764 ntBASIC25.59■■□□□ 1.69
PTCD2Q8WV60 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD2Q8WV60 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD2Q8WV60 MIR3648-2-201ENST00000581792 180 ntBASIC25.59■■□□□ 1.69
PTCD2Q8WV60 MIR3648-1-201ENST00000615959 180 ntBASIC25.59■■□□□ 1.69
PTCD2Q8WV60 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD2Q8WV60 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD2Q8WV60 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PTCD2Q8WV60 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.58■■□□□ 1.69
PTCD2Q8WV60 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.58■■□□□ 1.69
PTCD2Q8WV60 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.58■■□□□ 1.69
PTCD2Q8WV60 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.58■■□□□ 1.69
PTCD2Q8WV60 AC016575.1-201ENST00000607026 382 ntBASIC25.58■■□□□ 1.69
PTCD2Q8WV60 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PTCD2Q8WV60 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.58■■□□□ 1.69
PTCD2Q8WV60 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.58■■□□□ 1.69
PTCD2Q8WV60 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.58■■□□□ 1.69
PTCD2Q8WV60 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PTCD2Q8WV60 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PTCD2Q8WV60 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.57■■□□□ 1.68
PTCD2Q8WV60 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.57■■□□□ 1.68
PTCD2Q8WV60 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.57■■□□□ 1.68
PTCD2Q8WV60 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PTCD2Q8WV60 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PTCD2Q8WV60 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD2Q8WV60 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD2Q8WV60 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD2Q8WV60 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.56■■□□□ 1.68
PTCD2Q8WV60 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PTCD2Q8WV60 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.54■■□□□ 1.68
PTCD2Q8WV60 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PTCD2Q8WV60 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PTCD2Q8WV60 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PTCD2Q8WV60 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PTCD2Q8WV60 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PTCD2Q8WV60 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD2Q8WV60 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD2Q8WV60 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.52■■□□□ 1.68
PTCD2Q8WV60 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.52■■□□□ 1.68
PTCD2Q8WV60 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD2Q8WV60 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD2Q8WV60 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD2Q8WV60 DUX4L13-201ENST00000554103 1267 ntBASIC25.51■■□□□ 1.67
PTCD2Q8WV60 DUX4L15-201ENST00000611059 1267 ntBASIC25.51■■□□□ 1.67
PTCD2Q8WV60 DUX4L23-201ENST00000615195 1269 ntBASIC25.51■■□□□ 1.67
PTCD2Q8WV60 DUX4L24-201ENST00000617576 1269 ntBASIC25.51■■□□□ 1.67
PTCD2Q8WV60 DUX4L22-201ENST00000618238 1269 ntBASIC25.51■■□□□ 1.67
PTCD2Q8WV60 DUX4L20-201ENST00000619712 1269 ntBASIC25.51■■□□□ 1.67
PTCD2Q8WV60 DUX4L21-201ENST00000622058 1269 ntBASIC25.51■■□□□ 1.67
PTCD2Q8WV60 DUX4L10-201ENST00000622460 1267 ntBASIC25.51■■□□□ 1.67
PTCD2Q8WV60 DUX4L25-201ENST00000624915 1269 ntBASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms