Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CT55Q8WUE5 MIR219A2-201ENST00000608502 1504 ntBASIC23.98■■□□□ 1.43
CT55Q8WUE5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CT55Q8WUE5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CT55Q8WUE5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CT55Q8WUE5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.98■■□□□ 1.43
CT55Q8WUE5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.98■■□□□ 1.43
CT55Q8WUE5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CT55Q8WUE5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CT55Q8WUE5 AC060814.1-201ENST00000554326 538 ntBASIC23.97■■□□□ 1.43
CT55Q8WUE5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CT55Q8WUE5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.96■■□□□ 1.43
CT55Q8WUE5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CT55Q8WUE5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.95■■□□□ 1.42
CT55Q8WUE5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CT55Q8WUE5 ST7-AS1-201ENST00000456775 1889 ntBASIC23.95■■□□□ 1.42
CT55Q8WUE5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CT55Q8WUE5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CT55Q8WUE5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CT55Q8WUE5 NTF6A-201ENST00000591175 560 ntBASIC23.94■■□□□ 1.42
CT55Q8WUE5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CT55Q8WUE5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CT55Q8WUE5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CT55Q8WUE5 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CT55Q8WUE5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CT55Q8WUE5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CT55Q8WUE5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CT55Q8WUE5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CT55Q8WUE5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.93■■□□□ 1.42
CT55Q8WUE5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CT55Q8WUE5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CT55Q8WUE5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.92■■□□□ 1.42
CT55Q8WUE5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CT55Q8WUE5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CT55Q8WUE5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.92■■□□□ 1.42
CT55Q8WUE5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CT55Q8WUE5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CT55Q8WUE5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CT55Q8WUE5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CT55Q8WUE5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CT55Q8WUE5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CT55Q8WUE5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CT55Q8WUE5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CT55Q8WUE5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CT55Q8WUE5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CT55Q8WUE5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
CT55Q8WUE5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.89■■□□□ 1.41
CT55Q8WUE5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CT55Q8WUE5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CT55Q8WUE5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.88■■□□□ 1.41
CT55Q8WUE5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CT55Q8WUE5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.85■■□□□ 1.41
CT55Q8WUE5 AC012354.3-201ENST00000623734 483 ntBASIC23.85■■□□□ 1.41
CT55Q8WUE5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CT55Q8WUE5 AP004833.2-201ENST00000532228 1454 ntBASIC23.85■■□□□ 1.41
CT55Q8WUE5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CT55Q8WUE5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.84■■□□□ 1.41
CT55Q8WUE5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.84■■□□□ 1.41
CT55Q8WUE5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CT55Q8WUE5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.83■■□□□ 1.41
CT55Q8WUE5 AC092296.2-201ENST00000589470 999 ntBASIC23.83■■□□□ 1.41
CT55Q8WUE5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CT55Q8WUE5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CT55Q8WUE5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CT55Q8WUE5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.82■■□□□ 1.4
CT55Q8WUE5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CT55Q8WUE5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.82■■□□□ 1.4
CT55Q8WUE5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.81■■□□□ 1.4
CT55Q8WUE5 U85056.1-201ENST00000616429 682 ntBASIC23.81■■□□□ 1.4
CT55Q8WUE5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.81■■□□□ 1.4
CT55Q8WUE5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CT55Q8WUE5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.8■■□□□ 1.4
CT55Q8WUE5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CT55Q8WUE5 AC126177.7-201ENST00000547904 679 ntBASIC23.8■■□□□ 1.4
CT55Q8WUE5 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.8■■□□□ 1.4
CT55Q8WUE5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CT55Q8WUE5 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.8■■□□□ 1.4
CT55Q8WUE5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CT55Q8WUE5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CT55Q8WUE5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CT55Q8WUE5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.79■■□□□ 1.4
CT55Q8WUE5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CT55Q8WUE5 AC100797.4-201ENST00000631653 1827 ntBASIC23.78■■□□□ 1.4
CT55Q8WUE5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CT55Q8WUE5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.78■■□□□ 1.4
CT55Q8WUE5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CT55Q8WUE5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CT55Q8WUE5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CT55Q8WUE5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CT55Q8WUE5 ECEL1P2-201ENST00000461596 1295 ntBASIC23.76■■□□□ 1.39
CT55Q8WUE5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CT55Q8WUE5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CT55Q8WUE5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.75■■□□□ 1.39
CT55Q8WUE5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CT55Q8WUE5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CT55Q8WUE5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CT55Q8WUE5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.74■■□□□ 1.39
CT55Q8WUE5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CT55Q8WUE5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CT55Q8WUE5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms