Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg4Q8VHY0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.52■□□□□ 0.87
Cspg4Q8VHY0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Cspg4Q8VHY0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cspg4Q8VHY0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg4Q8VHY0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg4Q8VHY0 Gm15820-201ENSMUST00000201566 728 ntBASIC20.5■□□□□ 0.87
Cspg4Q8VHY0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg4Q8VHY0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg4Q8VHY0 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.5■□□□□ 0.87
Cspg4Q8VHY0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Cspg4Q8VHY0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg4Q8VHY0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg4Q8VHY0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Cspg4Q8VHY0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cspg4Q8VHY0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cspg4Q8VHY0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cspg4Q8VHY0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cspg4Q8VHY0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg4Q8VHY0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg4Q8VHY0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg4Q8VHY0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cspg4Q8VHY0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.46■□□□□ 0.87
Cspg4Q8VHY0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cspg4Q8VHY0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
Cspg4Q8VHY0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cspg4Q8VHY0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cspg4Q8VHY0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cspg4Q8VHY0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cspg4Q8VHY0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.44■□□□□ 0.86
Cspg4Q8VHY0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cspg4Q8VHY0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cspg4Q8VHY0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.44■□□□□ 0.86
Cspg4Q8VHY0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cspg4Q8VHY0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.43■□□□□ 0.86
Cspg4Q8VHY0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.43■□□□□ 0.86
Cspg4Q8VHY0 Gm37136-201ENSMUST00000194368 194 ntBASIC20.43■□□□□ 0.86
Cspg4Q8VHY0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cspg4Q8VHY0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.43■□□□□ 0.86
Cspg4Q8VHY0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cspg4Q8VHY0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Cspg4Q8VHY0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.42■□□□□ 0.86
Cspg4Q8VHY0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cspg4Q8VHY0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cspg4Q8VHY0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cspg4Q8VHY0 Gm45102-201ENSMUST00000207427 857 ntBASIC20.41■□□□□ 0.86
Cspg4Q8VHY0 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.4■□□□□ 0.86
Cspg4Q8VHY0 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.4■□□□□ 0.86
Cspg4Q8VHY0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cspg4Q8VHY0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cspg4Q8VHY0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cspg4Q8VHY0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cspg4Q8VHY0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cspg4Q8VHY0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cspg4Q8VHY0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cspg4Q8VHY0 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.38■□□□□ 0.85
Cspg4Q8VHY0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cspg4Q8VHY0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cspg4Q8VHY0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cspg4Q8VHY0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cspg4Q8VHY0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cspg4Q8VHY0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Cspg4Q8VHY0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cspg4Q8VHY0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.37■□□□□ 0.85
Cspg4Q8VHY0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.37■□□□□ 0.85
Cspg4Q8VHY0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cspg4Q8VHY0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.36■□□□□ 0.85
Cspg4Q8VHY0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cspg4Q8VHY0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cspg4Q8VHY0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.34■□□□□ 0.85
Cspg4Q8VHY0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cspg4Q8VHY0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cspg4Q8VHY0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cspg4Q8VHY0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.33■□□□□ 0.84
Cspg4Q8VHY0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cspg4Q8VHY0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.32■□□□□ 0.84
Cspg4Q8VHY0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cspg4Q8VHY0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.32■□□□□ 0.84
Cspg4Q8VHY0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cspg4Q8VHY0 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.32■□□□□ 0.84
Cspg4Q8VHY0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cspg4Q8VHY0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cspg4Q8VHY0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.31■□□□□ 0.84
Cspg4Q8VHY0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.31■□□□□ 0.84
Cspg4Q8VHY0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cspg4Q8VHY0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cspg4Q8VHY0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cspg4Q8VHY0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cspg4Q8VHY0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cspg4Q8VHY0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cspg4Q8VHY0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cspg4Q8VHY0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cspg4Q8VHY0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cspg4Q8VHY0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.29■□□□□ 0.84
Cspg4Q8VHY0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cspg4Q8VHY0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cspg4Q8VHY0 Gm14117-201ENSMUST00000122417 843 ntBASIC20.28■□□□□ 0.84
Cspg4Q8VHY0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.28■□□□□ 0.84
Cspg4Q8VHY0 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.28■□□□□ 0.84
Cspg4Q8VHY0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms