Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.47■■□□□ 1.67
Lmcd1Q8VEE1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Lmcd1Q8VEE1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lmcd1Q8VEE1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lmcd1Q8VEE1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Lmcd1Q8VEE1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
Lmcd1Q8VEE1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lmcd1Q8VEE1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lmcd1Q8VEE1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lmcd1Q8VEE1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Lmcd1Q8VEE1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.41■■□□□ 1.66
Lmcd1Q8VEE1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Lmcd1Q8VEE1 Zxda-201ENSMUST00000117281 2621 ntBASIC25.41■■□□□ 1.66
Lmcd1Q8VEE1 Gm9812-201ENSMUST00000061934 968 ntBASIC25.4■■□□□ 1.66
Lmcd1Q8VEE1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Lmcd1Q8VEE1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Lmcd1Q8VEE1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Lmcd1Q8VEE1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 Rps24-207ENSMUST00000224568 714 ntBASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Lmcd1Q8VEE1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Lmcd1Q8VEE1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Lmcd1Q8VEE1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Lmcd1Q8VEE1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Lmcd1Q8VEE1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Lmcd1Q8VEE1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.32■■□□□ 1.64
Lmcd1Q8VEE1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.32■■□□□ 1.64
Lmcd1Q8VEE1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.31■■□□□ 1.64
Lmcd1Q8VEE1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Lmcd1Q8VEE1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Lmcd1Q8VEE1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Lmcd1Q8VEE1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.3■■□□□ 1.64
Lmcd1Q8VEE1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Lmcd1Q8VEE1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.28■■□□□ 1.64
Lmcd1Q8VEE1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Lmcd1Q8VEE1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
Lmcd1Q8VEE1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Lmcd1Q8VEE1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.27■■□□□ 1.64
Lmcd1Q8VEE1 Gm45102-201ENSMUST00000207427 857 ntBASIC25.26■■□□□ 1.63
Lmcd1Q8VEE1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.26■■□□□ 1.63
Lmcd1Q8VEE1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Lmcd1Q8VEE1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Lmcd1Q8VEE1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Lmcd1Q8VEE1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lmcd1Q8VEE1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lmcd1Q8VEE1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Lmcd1Q8VEE1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Lmcd1Q8VEE1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Lmcd1Q8VEE1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Lmcd1Q8VEE1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Lmcd1Q8VEE1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Lmcd1Q8VEE1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 Gm15820-201ENSMUST00000201566 728 ntBASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Lmcd1Q8VEE1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.18■■□□□ 1.62
Lmcd1Q8VEE1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Lmcd1Q8VEE1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Lmcd1Q8VEE1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.17■■□□□ 1.62
Lmcd1Q8VEE1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Lmcd1Q8VEE1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Lmcd1Q8VEE1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Lmcd1Q8VEE1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Gm43566-201ENSMUST00000196851 808 ntBASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms