Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.09■■□□□ 1.77
SHROOM3Q8TF72 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SHROOM3Q8TF72 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.09■■□□□ 1.77
SHROOM3Q8TF72 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
SHROOM3Q8TF72 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.09■■□□□ 1.77
SHROOM3Q8TF72 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.08■■□□□ 1.77
SHROOM3Q8TF72 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SHROOM3Q8TF72 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SHROOM3Q8TF72 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SHROOM3Q8TF72 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SHROOM3Q8TF72 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SHROOM3Q8TF72 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SHROOM3Q8TF72 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.06■■□□□ 1.76
SHROOM3Q8TF72 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.06■■□□□ 1.76
SHROOM3Q8TF72 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SHROOM3Q8TF72 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.05■■□□□ 1.76
SHROOM3Q8TF72 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.05■■□□□ 1.76
SHROOM3Q8TF72 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.05■■□□□ 1.76
SHROOM3Q8TF72 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SHROOM3Q8TF72 MIR4449-201ENST00000578365 66 ntBASIC26.04■■□□□ 1.76
SHROOM3Q8TF72 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SHROOM3Q8TF72 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.04■■□□□ 1.76
SHROOM3Q8TF72 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SHROOM3Q8TF72 AC142086.6-201ENST00000621154 1765 ntBASIC26.03■■□□□ 1.76
SHROOM3Q8TF72 AP002414.2-202ENST00000590929 1450 ntBASIC26.03■■□□□ 1.76
SHROOM3Q8TF72 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.02■■□□□ 1.76
SHROOM3Q8TF72 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SHROOM3Q8TF72 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SHROOM3Q8TF72 ZNRF2P2-203ENST00000454624 420 ntBASIC26.02■■□□□ 1.76
SHROOM3Q8TF72 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
SHROOM3Q8TF72 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SHROOM3Q8TF72 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SHROOM3Q8TF72 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
SHROOM3Q8TF72 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
SHROOM3Q8TF72 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26■■□□□ 1.75
SHROOM3Q8TF72 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHROOM3Q8TF72 LINC01003-201ENST00000564834 1764 ntBASIC25.98■■□□□ 1.75
SHROOM3Q8TF72 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHROOM3Q8TF72 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.98■■□□□ 1.75
SHROOM3Q8TF72 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SHROOM3Q8TF72 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SHROOM3Q8TF72 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SHROOM3Q8TF72 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SHROOM3Q8TF72 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
SHROOM3Q8TF72 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
SHROOM3Q8TF72 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHROOM3Q8TF72 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.96■■□□□ 1.75
SHROOM3Q8TF72 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHROOM3Q8TF72 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHROOM3Q8TF72 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHROOM3Q8TF72 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SHROOM3Q8TF72 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
SHROOM3Q8TF72 AC018358.1-201ENST00000631079 1402 ntBASIC25.95■■□□□ 1.75
SHROOM3Q8TF72 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.95■■□□□ 1.75
SHROOM3Q8TF72 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SHROOM3Q8TF72 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SHROOM3Q8TF72 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
SHROOM3Q8TF72 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.94■■□□□ 1.74
SHROOM3Q8TF72 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.94■■□□□ 1.74
SHROOM3Q8TF72 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHROOM3Q8TF72 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 LINC01971-201ENST00000617888 1048 ntBASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.93■■□□□ 1.74
SHROOM3Q8TF72 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SHROOM3Q8TF72 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SHROOM3Q8TF72 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SHROOM3Q8TF72 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.91■■□□□ 1.74
SHROOM3Q8TF72 CR559946.2-201ENST00000623684 991 ntBASIC25.91■■□□□ 1.74
SHROOM3Q8TF72 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SHROOM3Q8TF72 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHROOM3Q8TF72 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.89■■□□□ 1.74
SHROOM3Q8TF72 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SHROOM3Q8TF72 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
SHROOM3Q8TF72 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.89■■□□□ 1.73
SHROOM3Q8TF72 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.89■■□□□ 1.73
SHROOM3Q8TF72 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SHROOM3Q8TF72 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 DUX4L13-201ENST00000554103 1267 ntBASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 DUX4L15-201ENST00000611059 1267 ntBASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 DUX4L23-201ENST00000615195 1269 ntBASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 DUX4L24-201ENST00000617576 1269 ntBASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 DUX4L22-201ENST00000618238 1269 ntBASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 DUX4L20-201ENST00000619712 1269 ntBASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 DUX4L21-201ENST00000622058 1269 ntBASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 DUX4L10-201ENST00000622460 1267 ntBASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 DUX4L25-201ENST00000624915 1269 ntBASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHROOM3Q8TF72 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.87■■□□□ 1.73
SHROOM3Q8TF72 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SHROOM3Q8TF72 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM3Q8TF72 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM3Q8TF72 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms