Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
PPP4R1Q8TF05 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R1Q8TF05 AC005559.1-201ENST00000589661 871 ntBASIC25.22■■□□□ 1.63
PPP4R1Q8TF05 AC127502.1-201ENST00000399971 1502 ntBASIC25.22■■□□□ 1.63
PPP4R1Q8TF05 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R1Q8TF05 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R1Q8TF05 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R1Q8TF05 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R1Q8TF05 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R1Q8TF05 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R1Q8TF05 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R1Q8TF05 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.2■■□□□ 1.62
PPP4R1Q8TF05 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R1Q8TF05 AC044849.2-201ENST00000606596 710 ntBASIC25.2■■□□□ 1.62
PPP4R1Q8TF05 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
PPP4R1Q8TF05 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
PPP4R1Q8TF05 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
PPP4R1Q8TF05 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R1Q8TF05 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R1Q8TF05 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.19■■□□□ 1.62
PPP4R1Q8TF05 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R1Q8TF05 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PPP4R1Q8TF05 LINC01003-201ENST00000564834 1764 ntBASIC25.18■■□□□ 1.62
PPP4R1Q8TF05 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PPP4R1Q8TF05 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PPP4R1Q8TF05 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R1Q8TF05 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R1Q8TF05 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R1Q8TF05 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.17■■□□□ 1.62
PPP4R1Q8TF05 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R1Q8TF05 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.16■■□□□ 1.62
PPP4R1Q8TF05 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.16■■□□□ 1.62
PPP4R1Q8TF05 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R1Q8TF05 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R1Q8TF05 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R1Q8TF05 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.15■■□□□ 1.62
PPP4R1Q8TF05 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.14■■□□□ 1.62
PPP4R1Q8TF05 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4R1Q8TF05 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.14■■□□□ 1.61
PPP4R1Q8TF05 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
PPP4R1Q8TF05 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.13■■□□□ 1.61
PPP4R1Q8TF05 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R1Q8TF05 ABHD17AP4-201ENST00000411545 909 ntBASIC25.13■■□□□ 1.61
PPP4R1Q8TF05 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R1Q8TF05 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
PPP4R1Q8TF05 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R1Q8TF05 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PPP4R1Q8TF05 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R1Q8TF05 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PPP4R1Q8TF05 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R1Q8TF05 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R1Q8TF05 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PPP4R1Q8TF05 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R1Q8TF05 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R1Q8TF05 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
PPP4R1Q8TF05 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R1Q8TF05 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.1■■□□□ 1.61
PPP4R1Q8TF05 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R1Q8TF05 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R1Q8TF05 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R1Q8TF05 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4R1Q8TF05 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4R1Q8TF05 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PPP4R1Q8TF05 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PPP4R1Q8TF05 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PPP4R1Q8TF05 MIR7108-201ENST00000614319 87 ntBASIC25.08■■□□□ 1.61
PPP4R1Q8TF05 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.08■■□□□ 1.61
PPP4R1Q8TF05 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PPP4R1Q8TF05 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
PPP4R1Q8TF05 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.07■■□□□ 1.6
PPP4R1Q8TF05 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PPP4R1Q8TF05 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
PPP4R1Q8TF05 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.07■■□□□ 1.6
PPP4R1Q8TF05 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PPP4R1Q8TF05 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPP4R1Q8TF05 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPP4R1Q8TF05 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.06■■□□□ 1.6
PPP4R1Q8TF05 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPP4R1Q8TF05 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PPP4R1Q8TF05 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.05■■□□□ 1.6
PPP4R1Q8TF05 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
PPP4R1Q8TF05 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PPP4R1Q8TF05 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
PPP4R1Q8TF05 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4R1Q8TF05 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4R1Q8TF05 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.04■■□□□ 1.6
PPP4R1Q8TF05 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.03■■□□□ 1.6
PPP4R1Q8TF05 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
PPP4R1Q8TF05 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4R1Q8TF05 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4R1Q8TF05 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4R1Q8TF05 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4R1Q8TF05 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4R1Q8TF05 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4R1Q8TF05 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4R1Q8TF05 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4R1Q8TF05 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.02■■□□□ 1.6
PPP4R1Q8TF05 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
PPP4R1Q8TF05 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.01■■□□□ 1.59
PPP4R1Q8TF05 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms