Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC38.91■■■■□ 3.82
ARHGEF40Q8TER5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
ARHGEF40Q8TER5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC38.9■■■■□ 3.82
ARHGEF40Q8TER5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC38.9■■■■□ 3.82
ARHGEF40Q8TER5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
ARHGEF40Q8TER5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC38.9■■■■□ 3.82
ARHGEF40Q8TER5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC38.89■■■■□ 3.82
ARHGEF40Q8TER5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.82
ARHGEF40Q8TER5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC38.88■■■■□ 3.81
ARHGEF40Q8TER5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
ARHGEF40Q8TER5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC38.87■■■■□ 3.81
ARHGEF40Q8TER5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC38.87■■■■□ 3.81
ARHGEF40Q8TER5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
ARHGEF40Q8TER5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC38.86■■■■□ 3.81
ARHGEF40Q8TER5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC38.86■■■■□ 3.81
ARHGEF40Q8TER5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC38.86■■■■□ 3.81
ARHGEF40Q8TER5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC38.85■■■■□ 3.81
ARHGEF40Q8TER5 AC110285.7-201ENST00000624417 1536 ntBASIC38.84■■■■□ 3.81
ARHGEF40Q8TER5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC38.84■■■■□ 3.81
ARHGEF40Q8TER5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
ARHGEF40Q8TER5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
ARHGEF40Q8TER5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC38.82■■■■□ 3.81
ARHGEF40Q8TER5 AC007029.1-201ENST00000604183 313 ntBASIC38.82■■■■□ 3.8
ARHGEF40Q8TER5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC38.81■■■■□ 3.8
ARHGEF40Q8TER5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC38.81■■■■□ 3.8
ARHGEF40Q8TER5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
ARHGEF40Q8TER5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
ARHGEF40Q8TER5 AL592293.1-201ENST00000502889 1188 ntBASIC38.8■■■■□ 3.8
ARHGEF40Q8TER5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC38.8■■■■□ 3.8
ARHGEF40Q8TER5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
ARHGEF40Q8TER5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC38.79■■■■□ 3.8
ARHGEF40Q8TER5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC38.78■■■■□ 3.8
ARHGEF40Q8TER5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC38.78■■■■□ 3.8
ARHGEF40Q8TER5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC38.78■■■■□ 3.8
ARHGEF40Q8TER5 MED25-210ENST00000612854 801 ntTSL 5 BASIC38.78■■■■□ 3.8
ARHGEF40Q8TER5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
ARHGEF40Q8TER5 MED25-214ENST00000622402 642 ntTSL 5 BASIC38.78■■■■□ 3.8
ARHGEF40Q8TER5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC38.78■■■■□ 3.8
ARHGEF40Q8TER5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC38.75■■■■□ 3.79
ARHGEF40Q8TER5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC38.75■■■■□ 3.79
ARHGEF40Q8TER5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC38.74■■■■□ 3.79
ARHGEF40Q8TER5 AC009831.1-201ENST00000580420 1582 ntBASIC38.74■■■■□ 3.79
ARHGEF40Q8TER5 AL161658.1-201ENST00000623641 1967 ntBASIC38.74■■■■□ 3.79
ARHGEF40Q8TER5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC38.73■■■■□ 3.79
ARHGEF40Q8TER5 AC127502.1-201ENST00000399971 1502 ntBASIC38.73■■■■□ 3.79
ARHGEF40Q8TER5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
ARHGEF40Q8TER5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
ARHGEF40Q8TER5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
ARHGEF40Q8TER5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
ARHGEF40Q8TER5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC38.72■■■■□ 3.79
ARHGEF40Q8TER5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
ARHGEF40Q8TER5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC38.71■■■■□ 3.79
ARHGEF40Q8TER5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC38.71■■■■□ 3.79
ARHGEF40Q8TER5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
ARHGEF40Q8TER5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC38.71■■■■□ 3.79
ARHGEF40Q8TER5 AC009299.2-201ENST00000482477 511 ntBASIC38.71■■■■□ 3.79
ARHGEF40Q8TER5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
ARHGEF40Q8TER5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
ARHGEF40Q8TER5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
ARHGEF40Q8TER5 DUX4L18-201ENST00000553347 1267 ntBASIC38.68■■■■□ 3.78
ARHGEF40Q8TER5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
ARHGEF40Q8TER5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
ARHGEF40Q8TER5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC38.68■■■■□ 3.78
ARHGEF40Q8TER5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC38.68■■■■□ 3.78
ARHGEF40Q8TER5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC38.67■■■■□ 3.78
ARHGEF40Q8TER5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC38.66■■■■□ 3.78
ARHGEF40Q8TER5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC38.66■■■■□ 3.78
ARHGEF40Q8TER5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC38.65■■■■□ 3.78
ARHGEF40Q8TER5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
ARHGEF40Q8TER5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
ARHGEF40Q8TER5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
ARHGEF40Q8TER5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC38.64■■■■□ 3.78
ARHGEF40Q8TER5 AC126177.7-201ENST00000547904 679 ntBASIC38.63■■■■□ 3.78
ARHGEF40Q8TER5 AC131212.1-201ENST00000613771 668 ntBASIC38.63■■■■□ 3.78
ARHGEF40Q8TER5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC38.63■■■■□ 3.78
ARHGEF40Q8TER5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
ARHGEF40Q8TER5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC38.63■■■■□ 3.77
ARHGEF40Q8TER5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC38.63■■■■□ 3.77
ARHGEF40Q8TER5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
ARHGEF40Q8TER5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC38.62■■■■□ 3.77
ARHGEF40Q8TER5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
ARHGEF40Q8TER5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC38.61■■■■□ 3.77
ARHGEF40Q8TER5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
ARHGEF40Q8TER5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC38.59■■■■□ 3.77
ARHGEF40Q8TER5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
ARHGEF40Q8TER5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC38.59■■■■□ 3.77
ARHGEF40Q8TER5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
ARHGEF40Q8TER5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
ARHGEF40Q8TER5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC38.57■■■■□ 3.76
ARHGEF40Q8TER5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
ARHGEF40Q8TER5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC38.55■■■■□ 3.76
ARHGEF40Q8TER5 REST-210ENST00000638187 1334 ntTSL 5 BASIC38.55■■■■□ 3.76
ARHGEF40Q8TER5 GUSBP5-201ENST00000418136 578 ntBASIC38.55■■■■□ 3.76
ARHGEF40Q8TER5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC38.55■■■■□ 3.76
ARHGEF40Q8TER5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC38.55■■■■□ 3.76
ARHGEF40Q8TER5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
ARHGEF40Q8TER5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC38.54■■■■□ 3.76
ARHGEF40Q8TER5 DUX4L9-201ENST00000449051 1259 ntBASIC38.53■■■■□ 3.76
ARHGEF40Q8TER5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC38.53■■■■□ 3.76
ARHGEF40Q8TER5 AC133552.2-201ENST00000619106 1032 ntBASIC38.53■■■■□ 3.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms