Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 GPX1-201ENST00000419349 1106 ntBASIC30.56■■■□□ 2.48
SH3RF3Q8TEJ3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.56■■■□□ 2.48
SH3RF3Q8TEJ3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
SH3RF3Q8TEJ3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SH3RF3Q8TEJ3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SH3RF3Q8TEJ3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
SH3RF3Q8TEJ3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SH3RF3Q8TEJ3 AP004833.2-201ENST00000532228 1454 ntBASIC30.55■■■□□ 2.48
SH3RF3Q8TEJ3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.55■■■□□ 2.48
SH3RF3Q8TEJ3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SH3RF3Q8TEJ3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SH3RF3Q8TEJ3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SH3RF3Q8TEJ3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.53■■■□□ 2.48
SH3RF3Q8TEJ3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SH3RF3Q8TEJ3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
SH3RF3Q8TEJ3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.53■■■□□ 2.48
SH3RF3Q8TEJ3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.53■■■□□ 2.48
SH3RF3Q8TEJ3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
SH3RF3Q8TEJ3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SH3RF3Q8TEJ3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.52■■■□□ 2.48
SH3RF3Q8TEJ3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SH3RF3Q8TEJ3 ABCB10P1-201ENST00000614297 2181 ntBASIC30.52■■■□□ 2.48
SH3RF3Q8TEJ3 AC100797.4-201ENST00000631653 1827 ntBASIC30.52■■■□□ 2.48
SH3RF3Q8TEJ3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SH3RF3Q8TEJ3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.51■■■□□ 2.47
SH3RF3Q8TEJ3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.5■■■□□ 2.47
SH3RF3Q8TEJ3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SH3RF3Q8TEJ3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SH3RF3Q8TEJ3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.49■■■□□ 2.47
SH3RF3Q8TEJ3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.49■■■□□ 2.47
SH3RF3Q8TEJ3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.49■■■□□ 2.47
SH3RF3Q8TEJ3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SH3RF3Q8TEJ3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
SH3RF3Q8TEJ3 AC148477.6-201ENST00000623746 465 ntBASIC30.48■■■□□ 2.47
SH3RF3Q8TEJ3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SH3RF3Q8TEJ3 AL139393.2-201ENST00000608721 2025 ntBASIC30.47■■■□□ 2.47
SH3RF3Q8TEJ3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SH3RF3Q8TEJ3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.47■■■□□ 2.47
SH3RF3Q8TEJ3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
SH3RF3Q8TEJ3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SH3RF3Q8TEJ3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.46■■■□□ 2.47
SH3RF3Q8TEJ3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
SH3RF3Q8TEJ3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.45■■■□□ 2.47
SH3RF3Q8TEJ3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.45■■■□□ 2.47
SH3RF3Q8TEJ3 RARRES2P2-201ENST00000394842 485 ntBASIC30.45■■■□□ 2.47
SH3RF3Q8TEJ3 AC022413.1-201ENST00000624602 984 ntBASIC30.45■■■□□ 2.47
SH3RF3Q8TEJ3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SH3RF3Q8TEJ3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.45■■■□□ 2.46
SH3RF3Q8TEJ3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
SH3RF3Q8TEJ3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.45■■■□□ 2.46
SH3RF3Q8TEJ3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.45■■■□□ 2.46
SH3RF3Q8TEJ3 MIR219A2-201ENST00000608502 1504 ntBASIC30.44■■■□□ 2.46
SH3RF3Q8TEJ3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.44■■■□□ 2.46
SH3RF3Q8TEJ3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SH3RF3Q8TEJ3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SH3RF3Q8TEJ3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.42■■■□□ 2.46
SH3RF3Q8TEJ3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.41■■■□□ 2.46
SH3RF3Q8TEJ3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SH3RF3Q8TEJ3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.41■■■□□ 2.46
SH3RF3Q8TEJ3 RNF126P1-201ENST00000567452 1320 ntBASIC30.41■■■□□ 2.46
SH3RF3Q8TEJ3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SH3RF3Q8TEJ3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SH3RF3Q8TEJ3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.41■■■□□ 2.46
SH3RF3Q8TEJ3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
SH3RF3Q8TEJ3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SH3RF3Q8TEJ3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SH3RF3Q8TEJ3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
SH3RF3Q8TEJ3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
SH3RF3Q8TEJ3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SH3RF3Q8TEJ3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SH3RF3Q8TEJ3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SH3RF3Q8TEJ3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SH3RF3Q8TEJ3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH3RF3Q8TEJ3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH3RF3Q8TEJ3 ABCB10P3-201ENST00000561950 2166 ntBASIC30.35■■■□□ 2.45
SH3RF3Q8TEJ3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
SH3RF3Q8TEJ3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.33■■■□□ 2.45
SH3RF3Q8TEJ3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.33■■■□□ 2.45
SH3RF3Q8TEJ3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
SH3RF3Q8TEJ3 AC060814.1-201ENST00000554326 538 ntBASIC30.32■■■□□ 2.44
SH3RF3Q8TEJ3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
SH3RF3Q8TEJ3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
SH3RF3Q8TEJ3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SH3RF3Q8TEJ3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.31■■■□□ 2.44
SH3RF3Q8TEJ3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SH3RF3Q8TEJ3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
SH3RF3Q8TEJ3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.3■■■□□ 2.44
SH3RF3Q8TEJ3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SH3RF3Q8TEJ3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.3■■■□□ 2.44
SH3RF3Q8TEJ3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.3■■■□□ 2.44
SH3RF3Q8TEJ3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
SH3RF3Q8TEJ3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SH3RF3Q8TEJ3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SH3RF3Q8TEJ3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SH3RF3Q8TEJ3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SH3RF3Q8TEJ3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SH3RF3Q8TEJ3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.28■■■□□ 2.44
SH3RF3Q8TEJ3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.27■■■□□ 2.44
SH3RF3Q8TEJ3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SH3RF3Q8TEJ3 ABHD17AP5-201ENST00000580133 923 ntBASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms