Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
SH3TC1Q8TE82 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
SH3TC1Q8TE82 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
SH3TC1Q8TE82 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.09■■■□□ 2.73
SH3TC1Q8TE82 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.09■■■□□ 2.73
SH3TC1Q8TE82 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SH3TC1Q8TE82 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
SH3TC1Q8TE82 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
SH3TC1Q8TE82 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.09■■■□□ 2.73
SH3TC1Q8TE82 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SH3TC1Q8TE82 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
SH3TC1Q8TE82 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SH3TC1Q8TE82 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SH3TC1Q8TE82 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
SH3TC1Q8TE82 ST7-AS1-201ENST00000456775 1889 ntBASIC32.06■■■□□ 2.72
SH3TC1Q8TE82 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
SH3TC1Q8TE82 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
SH3TC1Q8TE82 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SH3TC1Q8TE82 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.06■■■□□ 2.72
SH3TC1Q8TE82 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.06■■■□□ 2.72
SH3TC1Q8TE82 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
SH3TC1Q8TE82 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
SH3TC1Q8TE82 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.05■■■□□ 2.72
SH3TC1Q8TE82 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.05■■■□□ 2.72
SH3TC1Q8TE82 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SH3TC1Q8TE82 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SH3TC1Q8TE82 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SH3TC1Q8TE82 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SH3TC1Q8TE82 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.02■■■□□ 2.72
SH3TC1Q8TE82 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
SH3TC1Q8TE82 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.72
SH3TC1Q8TE82 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
SH3TC1Q8TE82 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SH3TC1Q8TE82 MIR219A2-201ENST00000608502 1504 ntBASIC32■■■□□ 2.71
SH3TC1Q8TE82 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SH3TC1Q8TE82 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32■■■□□ 2.71
SH3TC1Q8TE82 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SH3TC1Q8TE82 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SH3TC1Q8TE82 AC060814.1-201ENST00000554326 538 ntBASIC31.99■■■□□ 2.71
SH3TC1Q8TE82 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.97■■■□□ 2.71
SH3TC1Q8TE82 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SH3TC1Q8TE82 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.97■■■□□ 2.71
SH3TC1Q8TE82 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SH3TC1Q8TE82 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SH3TC1Q8TE82 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.96■■■□□ 2.71
SH3TC1Q8TE82 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SH3TC1Q8TE82 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
SH3TC1Q8TE82 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SH3TC1Q8TE82 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
SH3TC1Q8TE82 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
SH3TC1Q8TE82 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.94■■■□□ 2.7
SH3TC1Q8TE82 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
SH3TC1Q8TE82 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
SH3TC1Q8TE82 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SH3TC1Q8TE82 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SH3TC1Q8TE82 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SH3TC1Q8TE82 AP004833.2-201ENST00000532228 1454 ntBASIC31.92■■■□□ 2.7
SH3TC1Q8TE82 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SH3TC1Q8TE82 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SH3TC1Q8TE82 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
SH3TC1Q8TE82 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.9■■■□□ 2.7
SH3TC1Q8TE82 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
SH3TC1Q8TE82 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
SH3TC1Q8TE82 NTF6A-201ENST00000591175 560 ntBASIC31.9■■■□□ 2.7
SH3TC1Q8TE82 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
SH3TC1Q8TE82 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
SH3TC1Q8TE82 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
SH3TC1Q8TE82 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SH3TC1Q8TE82 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
SH3TC1Q8TE82 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.87■■■□□ 2.69
SH3TC1Q8TE82 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SH3TC1Q8TE82 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.85■■■□□ 2.69
SH3TC1Q8TE82 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SH3TC1Q8TE82 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.85■■■□□ 2.69
SH3TC1Q8TE82 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
SH3TC1Q8TE82 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.84■■■□□ 2.69
SH3TC1Q8TE82 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SH3TC1Q8TE82 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
SH3TC1Q8TE82 AC092296.2-201ENST00000589470 999 ntBASIC31.83■■■□□ 2.69
SH3TC1Q8TE82 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
SH3TC1Q8TE82 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SH3TC1Q8TE82 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SH3TC1Q8TE82 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SH3TC1Q8TE82 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.79■■■□□ 2.68
SH3TC1Q8TE82 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.79■■■□□ 2.68
SH3TC1Q8TE82 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
SH3TC1Q8TE82 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.79■■■□□ 2.68
SH3TC1Q8TE82 AC100797.4-201ENST00000631653 1827 ntBASIC31.78■■■□□ 2.68
SH3TC1Q8TE82 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.78■■■□□ 2.68
SH3TC1Q8TE82 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SH3TC1Q8TE82 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.78■■■□□ 2.68
SH3TC1Q8TE82 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SH3TC1Q8TE82 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SH3TC1Q8TE82 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.76■■■□□ 2.68
SH3TC1Q8TE82 AC012354.3-201ENST00000623734 483 ntBASIC31.76■■■□□ 2.68
SH3TC1Q8TE82 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
SH3TC1Q8TE82 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
SH3TC1Q8TE82 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
SH3TC1Q8TE82 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.75■■■□□ 2.67
SH3TC1Q8TE82 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms