Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Sh3kbp1Q8R550 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.91■■□□□ 1.42
Sh3kbp1Q8R550 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.91■■□□□ 1.42
Sh3kbp1Q8R550 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.91■■□□□ 1.42
Sh3kbp1Q8R550 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Sh3kbp1Q8R550 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Sh3kbp1Q8R550 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sh3kbp1Q8R550 Gm6311-201ENSMUST00000073790 878 ntBASIC23.9■■□□□ 1.42
Sh3kbp1Q8R550 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3kbp1Q8R550 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.89■■□□□ 1.41
Sh3kbp1Q8R550 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Sh3kbp1Q8R550 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3kbp1Q8R550 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Sh3kbp1Q8R550 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.86■■□□□ 1.41
Sh3kbp1Q8R550 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Sh3kbp1Q8R550 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3kbp1Q8R550 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.85■■□□□ 1.41
Sh3kbp1Q8R550 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3kbp1Q8R550 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3kbp1Q8R550 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3kbp1Q8R550 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.84■■□□□ 1.41
Sh3kbp1Q8R550 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.83■■□□□ 1.41
Sh3kbp1Q8R550 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3kbp1Q8R550 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Sh3kbp1Q8R550 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3kbp1Q8R550 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3kbp1Q8R550 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Sh3kbp1Q8R550 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3kbp1Q8R550 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Sh3kbp1Q8R550 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3kbp1Q8R550 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3kbp1Q8R550 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3kbp1Q8R550 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3kbp1Q8R550 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Sh3kbp1Q8R550 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3kbp1Q8R550 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3kbp1Q8R550 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Sh3kbp1Q8R550 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3kbp1Q8R550 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3kbp1Q8R550 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3kbp1Q8R550 Cap2-205ENSMUST00000225824 1634 ntBASIC23.77■■□□□ 1.4
Sh3kbp1Q8R550 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sh3kbp1Q8R550 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.77■■□□□ 1.4
Sh3kbp1Q8R550 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sh3kbp1Q8R550 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh3kbp1Q8R550 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.74■■□□□ 1.39
Sh3kbp1Q8R550 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sh3kbp1Q8R550 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sh3kbp1Q8R550 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sh3kbp1Q8R550 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Sh3kbp1Q8R550 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sh3kbp1Q8R550 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.71■■□□□ 1.39
Sh3kbp1Q8R550 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Sh3kbp1Q8R550 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sh3kbp1Q8R550 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Sh3kbp1Q8R550 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Sh3kbp1Q8R550 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sh3kbp1Q8R550 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3kbp1Q8R550 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3kbp1Q8R550 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3kbp1Q8R550 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3kbp1Q8R550 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sh3kbp1Q8R550 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Sh3kbp1Q8R550 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sh3kbp1Q8R550 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sh3kbp1Q8R550 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Sh3kbp1Q8R550 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.64■■□□□ 1.37
Sh3kbp1Q8R550 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sh3kbp1Q8R550 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.62■■□□□ 1.37
Sh3kbp1Q8R550 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh3kbp1Q8R550 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Sh3kbp1Q8R550 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sh3kbp1Q8R550 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.59■■□□□ 1.37
Sh3kbp1Q8R550 Scarna2-201ENSMUST00000157560 414 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms