Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27■■□□□ 1.91
Pspc1Q8R326 Cap2-205ENSMUST00000225824 1634 ntBASIC27■■□□□ 1.91
Pspc1Q8R326 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Pspc1Q8R326 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pspc1Q8R326 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pspc1Q8R326 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
Pspc1Q8R326 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Pspc1Q8R326 Mir3960-201ENSMUST00000198213 73 ntBASIC26.98■■□□□ 1.91
Pspc1Q8R326 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pspc1Q8R326 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.96■■□□□ 1.91
Pspc1Q8R326 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pspc1Q8R326 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.96■■□□□ 1.91
Pspc1Q8R326 Scarna2-201ENSMUST00000157560 414 ntBASIC26.95■■□□□ 1.9
Pspc1Q8R326 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pspc1Q8R326 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pspc1Q8R326 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Pspc1Q8R326 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pspc1Q8R326 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.95■■□□□ 1.9
Pspc1Q8R326 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pspc1Q8R326 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pspc1Q8R326 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pspc1Q8R326 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pspc1Q8R326 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.92■■□□□ 1.9
Pspc1Q8R326 Gm45364-201ENSMUST00000210883 159 ntBASIC26.92■■□□□ 1.9
Pspc1Q8R326 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Pspc1Q8R326 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pspc1Q8R326 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pspc1Q8R326 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.91■■□□□ 1.9
Pspc1Q8R326 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pspc1Q8R326 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pspc1Q8R326 Gm9806-201ENSMUST00000051080 552 ntBASIC26.9■■□□□ 1.9
Pspc1Q8R326 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pspc1Q8R326 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
Pspc1Q8R326 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Pspc1Q8R326 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.88■■□□□ 1.89
Pspc1Q8R326 Gm11687-201ENSMUST00000118911 886 ntBASIC26.87■■□□□ 1.89
Pspc1Q8R326 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.87■■□□□ 1.89
Pspc1Q8R326 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pspc1Q8R326 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
Pspc1Q8R326 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pspc1Q8R326 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.85■■□□□ 1.89
Pspc1Q8R326 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Pspc1Q8R326 Gm16437-201ENSMUST00000025669 507 ntBASIC26.85■■□□□ 1.89
Pspc1Q8R326 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.84■■□□□ 1.89
Pspc1Q8R326 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.84■■□□□ 1.89
Pspc1Q8R326 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.83■■□□□ 1.89
Pspc1Q8R326 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Pspc1Q8R326 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pspc1Q8R326 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pspc1Q8R326 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.82■■□□□ 1.88
Pspc1Q8R326 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Pspc1Q8R326 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pspc1Q8R326 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Pspc1Q8R326 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pspc1Q8R326 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Pspc1Q8R326 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pspc1Q8R326 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.78■■□□□ 1.88
Pspc1Q8R326 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Pspc1Q8R326 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pspc1Q8R326 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pspc1Q8R326 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.77■■□□□ 1.88
Pspc1Q8R326 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pspc1Q8R326 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pspc1Q8R326 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pspc1Q8R326 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pspc1Q8R326 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Pspc1Q8R326 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pspc1Q8R326 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.75■■□□□ 1.87
Pspc1Q8R326 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pspc1Q8R326 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pspc1Q8R326 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Pspc1Q8R326 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pspc1Q8R326 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.74■■□□□ 1.87
Pspc1Q8R326 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.74■■□□□ 1.87
Pspc1Q8R326 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Pspc1Q8R326 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pspc1Q8R326 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Pspc1Q8R326 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pspc1Q8R326 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pspc1Q8R326 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pspc1Q8R326 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pspc1Q8R326 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Pspc1Q8R326 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Pspc1Q8R326 Gm9812-201ENSMUST00000061934 968 ntBASIC26.7■■□□□ 1.86
Pspc1Q8R326 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pspc1Q8R326 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Pspc1Q8R326 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.68■■□□□ 1.86
Pspc1Q8R326 Gm12366-201ENSMUST00000121722 873 ntBASIC26.68■■□□□ 1.86
Pspc1Q8R326 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.68■■□□□ 1.86
Pspc1Q8R326 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.68■■□□□ 1.86
Pspc1Q8R326 Gm5786-201ENSMUST00000085368 882 ntBASIC26.68■■□□□ 1.86
Pspc1Q8R326 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Pspc1Q8R326 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.68■■□□□ 1.86
Pspc1Q8R326 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.68■■□□□ 1.86
Pspc1Q8R326 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pspc1Q8R326 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pspc1Q8R326 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pspc1Q8R326 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pspc1Q8R326 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.66■■□□□ 1.86
Pspc1Q8R326 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms