Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Atf7Q8R0S1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Atf7Q8R0S1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.59■■■□□ 2.01
Atf7Q8R0S1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Atf7Q8R0S1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Atf7Q8R0S1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Atf7Q8R0S1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Atf7Q8R0S1 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.58■■■□□ 2.01
Atf7Q8R0S1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Atf7Q8R0S1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.57■■■□□ 2
Atf7Q8R0S1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Atf7Q8R0S1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Atf7Q8R0S1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
Atf7Q8R0S1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.56■■■□□ 2
Atf7Q8R0S1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.55■■■□□ 2
Atf7Q8R0S1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Atf7Q8R0S1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
Atf7Q8R0S1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.54■■■□□ 2
Atf7Q8R0S1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Atf7Q8R0S1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Atf7Q8R0S1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Atf7Q8R0S1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.53■■■□□ 2
Atf7Q8R0S1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Atf7Q8R0S1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Atf7Q8R0S1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Atf7Q8R0S1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■■□□ 2
Atf7Q8R0S1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Atf7Q8R0S1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Atf7Q8R0S1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Atf7Q8R0S1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.49■■□□□ 1.99
Atf7Q8R0S1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Atf7Q8R0S1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Atf7Q8R0S1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Atf7Q8R0S1 Gm37136-201ENSMUST00000194368 194 ntBASIC27.47■■□□□ 1.99
Atf7Q8R0S1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Atf7Q8R0S1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.46■■□□□ 1.99
Atf7Q8R0S1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Atf7Q8R0S1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Atf7Q8R0S1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Atf7Q8R0S1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Atf7Q8R0S1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Atf7Q8R0S1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Atf7Q8R0S1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
Atf7Q8R0S1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Atf7Q8R0S1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Atf7Q8R0S1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Atf7Q8R0S1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Atf7Q8R0S1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Atf7Q8R0S1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Atf7Q8R0S1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Atf7Q8R0S1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Atf7Q8R0S1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Atf7Q8R0S1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
Atf7Q8R0S1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Atf7Q8R0S1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.4■■□□□ 1.98
Atf7Q8R0S1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Atf7Q8R0S1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Atf7Q8R0S1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
Atf7Q8R0S1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Atf7Q8R0S1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Atf7Q8R0S1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Atf7Q8R0S1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Atf7Q8R0S1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.36■■□□□ 1.97
Atf7Q8R0S1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Atf7Q8R0S1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
Atf7Q8R0S1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Atf7Q8R0S1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Atf7Q8R0S1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Atf7Q8R0S1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Atf7Q8R0S1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.34■■□□□ 1.97
Atf7Q8R0S1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Atf7Q8R0S1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Atf7Q8R0S1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.33■■□□□ 1.97
Atf7Q8R0S1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Atf7Q8R0S1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Atf7Q8R0S1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.32■■□□□ 1.96
Atf7Q8R0S1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
Atf7Q8R0S1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Atf7Q8R0S1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Atf7Q8R0S1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.31■■□□□ 1.96
Atf7Q8R0S1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Atf7Q8R0S1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Atf7Q8R0S1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Atf7Q8R0S1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Atf7Q8R0S1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.3■■□□□ 1.96
Atf7Q8R0S1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Atf7Q8R0S1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Atf7Q8R0S1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Atf7Q8R0S1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Atf7Q8R0S1 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.29■■□□□ 1.96
Atf7Q8R0S1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Atf7Q8R0S1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Atf7Q8R0S1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Atf7Q8R0S1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Atf7Q8R0S1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Atf7Q8R0S1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Atf7Q8R0S1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Atf7Q8R0S1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Atf7Q8R0S1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Atf7Q8R0S1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 165.9 ms