Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.44■■□□□ 1.82
SLC44A3Q8N4M1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SLC44A3Q8N4M1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC44A3Q8N4M1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC44A3Q8N4M1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SLC44A3Q8N4M1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.43■■□□□ 1.82
SLC44A3Q8N4M1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SLC44A3Q8N4M1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
SLC44A3Q8N4M1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.42■■□□□ 1.82
SLC44A3Q8N4M1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SLC44A3Q8N4M1 RARRES2P1-201ENST00000474487 481 ntBASIC26.41■■□□□ 1.82
SLC44A3Q8N4M1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC44A3Q8N4M1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC44A3Q8N4M1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC44A3Q8N4M1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SLC44A3Q8N4M1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC44A3Q8N4M1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC44A3Q8N4M1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.39■■□□□ 1.82
SLC44A3Q8N4M1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.39■■□□□ 1.82
SLC44A3Q8N4M1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC44A3Q8N4M1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC44A3Q8N4M1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC44A3Q8N4M1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC44A3Q8N4M1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.38■■□□□ 1.81
SLC44A3Q8N4M1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SLC44A3Q8N4M1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A3Q8N4M1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A3Q8N4M1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.37■■□□□ 1.81
SLC44A3Q8N4M1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A3Q8N4M1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A3Q8N4M1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.36■■□□□ 1.81
SLC44A3Q8N4M1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SLC44A3Q8N4M1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SLC44A3Q8N4M1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SLC44A3Q8N4M1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SLC44A3Q8N4M1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SLC44A3Q8N4M1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC44A3Q8N4M1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.33■■□□□ 1.81
SLC44A3Q8N4M1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC44A3Q8N4M1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC44A3Q8N4M1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC44A3Q8N4M1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.32■■□□□ 1.8
SLC44A3Q8N4M1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.32■■□□□ 1.8
SLC44A3Q8N4M1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC44A3Q8N4M1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC44A3Q8N4M1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SLC44A3Q8N4M1 AC126177.7-201ENST00000547904 679 ntBASIC26.31■■□□□ 1.8
SLC44A3Q8N4M1 AL135925.1-201ENST00000605920 1701 ntBASIC26.31■■□□□ 1.8
SLC44A3Q8N4M1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SLC44A3Q8N4M1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SLC44A3Q8N4M1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.29■■□□□ 1.8
SLC44A3Q8N4M1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC44A3Q8N4M1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC44A3Q8N4M1 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.29■■□□□ 1.8
SLC44A3Q8N4M1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SLC44A3Q8N4M1 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.29■■□□□ 1.8
SLC44A3Q8N4M1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC44A3Q8N4M1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
SLC44A3Q8N4M1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A3Q8N4M1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A3Q8N4M1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A3Q8N4M1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.28■■□□□ 1.8
SLC44A3Q8N4M1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.28■■□□□ 1.8
SLC44A3Q8N4M1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC44A3Q8N4M1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.27■■□□□ 1.8
SLC44A3Q8N4M1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SLC44A3Q8N4M1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC44A3Q8N4M1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
SLC44A3Q8N4M1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.25■■□□□ 1.79
SLC44A3Q8N4M1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.25■■□□□ 1.79
SLC44A3Q8N4M1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC44A3Q8N4M1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.24■■□□□ 1.79
SLC44A3Q8N4M1 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.24■■□□□ 1.79
SLC44A3Q8N4M1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC44A3Q8N4M1 AL157400.5-201ENST00000507624 621 ntBASIC26.23■■□□□ 1.79
SLC44A3Q8N4M1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC44A3Q8N4M1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.23■■□□□ 1.79
SLC44A3Q8N4M1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.23■■□□□ 1.79
SLC44A3Q8N4M1 AC129492.7-201ENST00000622992 756 ntBASIC26.23■■□□□ 1.79
SLC44A3Q8N4M1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC44A3Q8N4M1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.22■■□□□ 1.79
SLC44A3Q8N4M1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
SLC44A3Q8N4M1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SLC44A3Q8N4M1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SLC44A3Q8N4M1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.2■■□□□ 1.79
SLC44A3Q8N4M1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLC44A3Q8N4M1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.2■■□□□ 1.78
SLC44A3Q8N4M1 DUX4L18-201ENST00000553347 1267 ntBASIC26.2■■□□□ 1.78
SLC44A3Q8N4M1 AC007029.1-201ENST00000604183 313 ntBASIC26.2■■□□□ 1.78
SLC44A3Q8N4M1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC44A3Q8N4M1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC44A3Q8N4M1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.19■■□□□ 1.78
SLC44A3Q8N4M1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC44A3Q8N4M1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC44A3Q8N4M1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SLC44A3Q8N4M1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SLC44A3Q8N4M1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SLC44A3Q8N4M1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SLC44A3Q8N4M1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC44A3Q8N4M1 AL592293.1-201ENST00000502889 1188 ntBASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms