Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17■□□□□ 0.31
LINC01561Q8N1V8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01561Q8N1V8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 CAHM-201ENST00000604200 896 ntBASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LINC01561Q8N1V8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01561Q8N1V8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LINC01561Q8N1V8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC01561Q8N1V8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01561Q8N1V8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01561Q8N1V8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01561Q8N1V8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01561Q8N1V8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC01561Q8N1V8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.96■□□□□ 0.3
LINC01561Q8N1V8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
LINC01561Q8N1V8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01561Q8N1V8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01561Q8N1V8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC16.95■□□□□ 0.3
LINC01561Q8N1V8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC01561Q8N1V8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LINC01561Q8N1V8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01561Q8N1V8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.92■□□□□ 0.3
LINC01561Q8N1V8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01561Q8N1V8 AC135983.2-203ENST00000454486 1613 ntBASIC16.92■□□□□ 0.3
LINC01561Q8N1V8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 MIR762-201ENST00000390236 83 ntBASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 AC136428.2-201ENST00000563187 214 ntBASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 AC097358.2-201ENST00000607541 1159 ntBASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 AC108673.1-201ENST00000510422 1159 ntBASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 AC091060.1-201ENST00000623524 1766 ntBASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 LINC00273-201ENST00000539813 1452 ntBASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms