Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
ABCA6Q8N139 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
ABCA6Q8N139 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC38.71■■■■□ 3.79
ABCA6Q8N139 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC38.7■■■■□ 3.79
ABCA6Q8N139 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC38.7■■■■□ 3.79
ABCA6Q8N139 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
ABCA6Q8N139 MOB2-207ENST00000614710 705 ntTSL 5 BASIC38.7■■■■□ 3.79
ABCA6Q8N139 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC38.67■■■■□ 3.78
ABCA6Q8N139 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
ABCA6Q8N139 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC38.66■■■■□ 3.78
ABCA6Q8N139 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
ABCA6Q8N139 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC38.65■■■■□ 3.78
ABCA6Q8N139 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
ABCA6Q8N139 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC38.63■■■■□ 3.78
ABCA6Q8N139 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC38.63■■■■□ 3.77
ABCA6Q8N139 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
ABCA6Q8N139 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
ABCA6Q8N139 MED25-210ENST00000612854 801 ntTSL 5 BASIC38.63■■■■□ 3.77
ABCA6Q8N139 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
ABCA6Q8N139 MED25-214ENST00000622402 642 ntTSL 5 BASIC38.63■■■■□ 3.77
ABCA6Q8N139 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
ABCA6Q8N139 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC38.62■■■■□ 3.77
ABCA6Q8N139 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC38.61■■■■□ 3.77
ABCA6Q8N139 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC38.6■■■■□ 3.77
ABCA6Q8N139 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
ABCA6Q8N139 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC38.59■■■■□ 3.77
ABCA6Q8N139 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
ABCA6Q8N139 AL451085.2-201ENST00000605085 799 ntBASIC38.59■■■■□ 3.77
ABCA6Q8N139 ECEL1P2-201ENST00000461596 1295 ntBASIC38.58■■■■□ 3.77
ABCA6Q8N139 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
ABCA6Q8N139 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC38.57■■■■□ 3.77
ABCA6Q8N139 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
ABCA6Q8N139 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC38.56■■■■□ 3.76
ABCA6Q8N139 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC38.56■■■■□ 3.76
ABCA6Q8N139 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC38.56■■■■□ 3.76
ABCA6Q8N139 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
ABCA6Q8N139 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC38.55■■■■□ 3.76
ABCA6Q8N139 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC38.54■■■■□ 3.76
ABCA6Q8N139 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
ABCA6Q8N139 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC38.54■■■■□ 3.76
ABCA6Q8N139 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
ABCA6Q8N139 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
ABCA6Q8N139 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC38.53■■■■□ 3.76
ABCA6Q8N139 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
ABCA6Q8N139 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
ABCA6Q8N139 AC129492.7-201ENST00000622992 756 ntBASIC38.52■■■■□ 3.76
ABCA6Q8N139 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC38.52■■■■□ 3.76
ABCA6Q8N139 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC38.49■■■■□ 3.75
ABCA6Q8N139 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
ABCA6Q8N139 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
ABCA6Q8N139 HES4-204ENST00000484667 667 ntTSL 3 BASIC38.49■■■■□ 3.75
ABCA6Q8N139 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
ABCA6Q8N139 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC38.48■■■■□ 3.75
ABCA6Q8N139 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
ABCA6Q8N139 AC007029.1-201ENST00000604183 313 ntBASIC38.48■■■■□ 3.75
ABCA6Q8N139 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC38.47■■■■□ 3.75
ABCA6Q8N139 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC38.47■■■■□ 3.75
ABCA6Q8N139 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC38.47■■■■□ 3.75
ABCA6Q8N139 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
ABCA6Q8N139 AL035685.1-201ENST00000636663 812 ntBASIC38.46■■■■□ 3.75
ABCA6Q8N139 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
ABCA6Q8N139 AL592293.1-201ENST00000502889 1188 ntBASIC38.45■■■■□ 3.75
ABCA6Q8N139 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
ABCA6Q8N139 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC38.43■■■■□ 3.74
ABCA6Q8N139 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC38.43■■■■□ 3.74
ABCA6Q8N139 TRIR-205ENST00000592273 783 ntTSL 3 BASIC38.41■■■■□ 3.74
ABCA6Q8N139 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
ABCA6Q8N139 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
ABCA6Q8N139 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC38.41■■■■□ 3.74
ABCA6Q8N139 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC38.41■■■■□ 3.74
ABCA6Q8N139 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC38.4■■■■□ 3.74
ABCA6Q8N139 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC38.4■■■■□ 3.74
ABCA6Q8N139 AC009831.1-201ENST00000580420 1582 ntBASIC38.4■■■■□ 3.74
ABCA6Q8N139 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
ABCA6Q8N139 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC38.39■■■■□ 3.74
ABCA6Q8N139 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC38.39■■■■□ 3.74
ABCA6Q8N139 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC38.38■■■■□ 3.74
ABCA6Q8N139 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
ABCA6Q8N139 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC38.38■■■■□ 3.73
ABCA6Q8N139 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
ABCA6Q8N139 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
ABCA6Q8N139 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC38.37■■■■□ 3.73
ABCA6Q8N139 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC38.37■■■■□ 3.73
ABCA6Q8N139 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC38.36■■■■□ 3.73
ABCA6Q8N139 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
ABCA6Q8N139 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC38.36■■■■□ 3.73
ABCA6Q8N139 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC38.36■■■■□ 3.73
ABCA6Q8N139 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
ABCA6Q8N139 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC38.35■■■■□ 3.73
ABCA6Q8N139 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC38.35■■■■□ 3.73
ABCA6Q8N139 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC38.34■■■■□ 3.73
ABCA6Q8N139 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
ABCA6Q8N139 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
ABCA6Q8N139 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC38.33■■■■□ 3.73
ABCA6Q8N139 AC126177.7-201ENST00000547904 679 ntBASIC38.32■■■■□ 3.73
ABCA6Q8N139 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC38.32■■■■□ 3.72
ABCA6Q8N139 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC38.31■■■■□ 3.72
ABCA6Q8N139 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC38.31■■■■□ 3.72
ABCA6Q8N139 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC38.31■■■■□ 3.72
ABCA6Q8N139 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC38.31■■■■□ 3.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms