Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.5■■□□□ 1.99
Cchcr1Q8K2I2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Cchcr1Q8K2I2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Cchcr1Q8K2I2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
Cchcr1Q8K2I2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Cchcr1Q8K2I2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Cchcr1Q8K2I2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cchcr1Q8K2I2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cchcr1Q8K2I2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
Cchcr1Q8K2I2 Nkain2-201ENSMUST00000092602 558 ntBASIC27.47■■□□□ 1.99
Cchcr1Q8K2I2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cchcr1Q8K2I2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cchcr1Q8K2I2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Cchcr1Q8K2I2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cchcr1Q8K2I2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cchcr1Q8K2I2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Cchcr1Q8K2I2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cchcr1Q8K2I2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Cchcr1Q8K2I2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.45■■□□□ 1.98
Cchcr1Q8K2I2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Cchcr1Q8K2I2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
Cchcr1Q8K2I2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Cchcr1Q8K2I2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Cchcr1Q8K2I2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Cchcr1Q8K2I2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Cchcr1Q8K2I2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Cchcr1Q8K2I2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.41■■□□□ 1.98
Cchcr1Q8K2I2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cchcr1Q8K2I2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cchcr1Q8K2I2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.4■■□□□ 1.98
Cchcr1Q8K2I2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cchcr1Q8K2I2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Cchcr1Q8K2I2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cchcr1Q8K2I2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Cchcr1Q8K2I2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
Cchcr1Q8K2I2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Cchcr1Q8K2I2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cchcr1Q8K2I2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cchcr1Q8K2I2 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.36■■□□□ 1.97
Cchcr1Q8K2I2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Cchcr1Q8K2I2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
Cchcr1Q8K2I2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.35■■□□□ 1.97
Cchcr1Q8K2I2 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.35■■□□□ 1.97
Cchcr1Q8K2I2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cchcr1Q8K2I2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Cchcr1Q8K2I2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Cchcr1Q8K2I2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cchcr1Q8K2I2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.33■■□□□ 1.97
Cchcr1Q8K2I2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cchcr1Q8K2I2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Cchcr1Q8K2I2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.33■■□□□ 1.97
Cchcr1Q8K2I2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cchcr1Q8K2I2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Cchcr1Q8K2I2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
Cchcr1Q8K2I2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.32■■□□□ 1.96
Cchcr1Q8K2I2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Cchcr1Q8K2I2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cchcr1Q8K2I2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cchcr1Q8K2I2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cchcr1Q8K2I2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cchcr1Q8K2I2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cchcr1Q8K2I2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cchcr1Q8K2I2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.29■■□□□ 1.96
Cchcr1Q8K2I2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cchcr1Q8K2I2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cchcr1Q8K2I2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cchcr1Q8K2I2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Cchcr1Q8K2I2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cchcr1Q8K2I2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cchcr1Q8K2I2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.26■■□□□ 1.95
Cchcr1Q8K2I2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cchcr1Q8K2I2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.25■■□□□ 1.95
Cchcr1Q8K2I2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Cchcr1Q8K2I2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Cchcr1Q8K2I2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.24■■□□□ 1.95
Cchcr1Q8K2I2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Cchcr1Q8K2I2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Cchcr1Q8K2I2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cchcr1Q8K2I2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.23■■□□□ 1.95
Cchcr1Q8K2I2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cchcr1Q8K2I2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cchcr1Q8K2I2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cchcr1Q8K2I2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Cchcr1Q8K2I2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Cchcr1Q8K2I2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cchcr1Q8K2I2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.19■■□□□ 1.94
Cchcr1Q8K2I2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Cchcr1Q8K2I2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Cchcr1Q8K2I2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cchcr1Q8K2I2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Cchcr1Q8K2I2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.17■■□□□ 1.94
Cchcr1Q8K2I2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cchcr1Q8K2I2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cchcr1Q8K2I2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cchcr1Q8K2I2 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.16■■□□□ 1.94
Cchcr1Q8K2I2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cchcr1Q8K2I2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cchcr1Q8K2I2 Gm37136-201ENSMUST00000194368 194 ntBASIC27.15■■□□□ 1.94
Cchcr1Q8K2I2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cchcr1Q8K2I2 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.15■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms