Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL27A1Q8IZC6 AL157400.5-201ENST00000507624 621 ntBASIC24.52■■□□□ 1.52
COL27A1Q8IZC6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL27A1Q8IZC6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.52■■□□□ 1.52
COL27A1Q8IZC6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL27A1Q8IZC6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
COL27A1Q8IZC6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL27A1Q8IZC6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
COL27A1Q8IZC6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL27A1Q8IZC6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.51■■□□□ 1.51
COL27A1Q8IZC6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL27A1Q8IZC6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL27A1Q8IZC6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.5■■□□□ 1.51
COL27A1Q8IZC6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL27A1Q8IZC6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL27A1Q8IZC6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL27A1Q8IZC6 AL033527.3-201ENST00000566366 1196 ntBASIC24.49■■□□□ 1.51
COL27A1Q8IZC6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.49■■□□□ 1.51
COL27A1Q8IZC6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
COL27A1Q8IZC6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL27A1Q8IZC6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.48■■□□□ 1.51
COL27A1Q8IZC6 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.47■■□□□ 1.51
COL27A1Q8IZC6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL27A1Q8IZC6 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.47■■□□□ 1.51
COL27A1Q8IZC6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL27A1Q8IZC6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL27A1Q8IZC6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL27A1Q8IZC6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.46■■□□□ 1.51
COL27A1Q8IZC6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.46■■□□□ 1.51
COL27A1Q8IZC6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
COL27A1Q8IZC6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.45■■□□□ 1.51
COL27A1Q8IZC6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL27A1Q8IZC6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
COL27A1Q8IZC6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL27A1Q8IZC6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.45■■□□□ 1.5
COL27A1Q8IZC6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL27A1Q8IZC6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL27A1Q8IZC6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL27A1Q8IZC6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL27A1Q8IZC6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL27A1Q8IZC6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL27A1Q8IZC6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL27A1Q8IZC6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
COL27A1Q8IZC6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.41■■□□□ 1.5
COL27A1Q8IZC6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.4■■□□□ 1.5
COL27A1Q8IZC6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL27A1Q8IZC6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL27A1Q8IZC6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
COL27A1Q8IZC6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL27A1Q8IZC6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL27A1Q8IZC6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL27A1Q8IZC6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.37■■□□□ 1.49
COL27A1Q8IZC6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL27A1Q8IZC6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
COL27A1Q8IZC6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL27A1Q8IZC6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.36■■□□□ 1.49
COL27A1Q8IZC6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.36■■□□□ 1.49
COL27A1Q8IZC6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
COL27A1Q8IZC6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL27A1Q8IZC6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.35■■□□□ 1.49
COL27A1Q8IZC6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL27A1Q8IZC6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
COL27A1Q8IZC6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL27A1Q8IZC6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
COL27A1Q8IZC6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL27A1Q8IZC6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
COL27A1Q8IZC6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL27A1Q8IZC6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
COL27A1Q8IZC6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL27A1Q8IZC6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL27A1Q8IZC6 AC004987.1-201ENST00000428627 508 ntBASIC24.32■■□□□ 1.48
COL27A1Q8IZC6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.32■■□□□ 1.48
COL27A1Q8IZC6 TSPY13P-201ENST00000338964 914 ntBASIC24.31■■□□□ 1.48
COL27A1Q8IZC6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.31■■□□□ 1.48
COL27A1Q8IZC6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL27A1Q8IZC6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.3■■□□□ 1.48
COL27A1Q8IZC6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.3■■□□□ 1.48
COL27A1Q8IZC6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL27A1Q8IZC6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL27A1Q8IZC6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL27A1Q8IZC6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL27A1Q8IZC6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL27A1Q8IZC6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.28■■□□□ 1.48
COL27A1Q8IZC6 ECEL1P2-201ENST00000461596 1295 ntBASIC24.28■■□□□ 1.48
COL27A1Q8IZC6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.28■■□□□ 1.48
COL27A1Q8IZC6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.28■■□□□ 1.48
COL27A1Q8IZC6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
COL27A1Q8IZC6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL27A1Q8IZC6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL27A1Q8IZC6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.27■■□□□ 1.48
COL27A1Q8IZC6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms