Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEFF1Q8IYR6 MIR219A2-201ENST00000608502 1504 ntBASIC25.52■■□□□ 1.68
TMEFF1Q8IYR6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
TMEFF1Q8IYR6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.52■■□□□ 1.68
TMEFF1Q8IYR6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEFF1Q8IYR6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TMEFF1Q8IYR6 AL135925.1-201ENST00000605920 1701 ntBASIC25.51■■□□□ 1.67
TMEFF1Q8IYR6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.5■■□□□ 1.67
TMEFF1Q8IYR6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.49■■□□□ 1.67
TMEFF1Q8IYR6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
TMEFF1Q8IYR6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.48■■□□□ 1.67
TMEFF1Q8IYR6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
TMEFF1Q8IYR6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
TMEFF1Q8IYR6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TMEFF1Q8IYR6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TMEFF1Q8IYR6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
TMEFF1Q8IYR6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TMEFF1Q8IYR6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
TMEFF1Q8IYR6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TMEFF1Q8IYR6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TMEFF1Q8IYR6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEFF1Q8IYR6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.44■■□□□ 1.66
TMEFF1Q8IYR6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEFF1Q8IYR6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEFF1Q8IYR6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEFF1Q8IYR6 KRT18P60-201ENST00000312876 1297 ntBASIC25.44■■□□□ 1.66
TMEFF1Q8IYR6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.44■■□□□ 1.66
TMEFF1Q8IYR6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.44■■□□□ 1.66
TMEFF1Q8IYR6 AC092296.2-201ENST00000589470 999 ntBASIC25.44■■□□□ 1.66
TMEFF1Q8IYR6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEFF1Q8IYR6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TMEFF1Q8IYR6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.43■■□□□ 1.66
TMEFF1Q8IYR6 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.43■■□□□ 1.66
TMEFF1Q8IYR6 TSPY13P-201ENST00000338964 914 ntBASIC25.42■■□□□ 1.66
TMEFF1Q8IYR6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TMEFF1Q8IYR6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TMEFF1Q8IYR6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TMEFF1Q8IYR6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.41■■□□□ 1.66
TMEFF1Q8IYR6 AC004987.1-201ENST00000428627 508 ntBASIC25.41■■□□□ 1.66
TMEFF1Q8IYR6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TMEFF1Q8IYR6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TMEFF1Q8IYR6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TMEFF1Q8IYR6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEFF1Q8IYR6 ATP5G2P3-201ENST00000429083 425 ntBASIC25.39■■□□□ 1.66
TMEFF1Q8IYR6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TMEFF1Q8IYR6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TMEFF1Q8IYR6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEFF1Q8IYR6 ECEL1P2-201ENST00000461596 1295 ntBASIC25.38■■□□□ 1.65
TMEFF1Q8IYR6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.38■■□□□ 1.65
TMEFF1Q8IYR6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEFF1Q8IYR6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEFF1Q8IYR6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEFF1Q8IYR6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.37■■□□□ 1.65
TMEFF1Q8IYR6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEFF1Q8IYR6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEFF1Q8IYR6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TMEFF1Q8IYR6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
TMEFF1Q8IYR6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TMEFF1Q8IYR6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TMEFF1Q8IYR6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.36■■□□□ 1.65
TMEFF1Q8IYR6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.35■■□□□ 1.65
TMEFF1Q8IYR6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
TMEFF1Q8IYR6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TMEFF1Q8IYR6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TMEFF1Q8IYR6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TMEFF1Q8IYR6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.34■■□□□ 1.65
TMEFF1Q8IYR6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
TMEFF1Q8IYR6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.34■■□□□ 1.65
TMEFF1Q8IYR6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TMEFF1Q8IYR6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.33■■□□□ 1.65
TMEFF1Q8IYR6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.33■■□□□ 1.65
TMEFF1Q8IYR6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.33■■□□□ 1.65
TMEFF1Q8IYR6 AC126177.7-201ENST00000547904 679 ntBASIC25.32■■□□□ 1.64
TMEFF1Q8IYR6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.32■■□□□ 1.64
TMEFF1Q8IYR6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.32■■□□□ 1.64
TMEFF1Q8IYR6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TMEFF1Q8IYR6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
TMEFF1Q8IYR6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TMEFF1Q8IYR6 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.31■■□□□ 1.64
TMEFF1Q8IYR6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TMEFF1Q8IYR6 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.31■■□□□ 1.64
TMEFF1Q8IYR6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TMEFF1Q8IYR6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.3■■□□□ 1.64
TMEFF1Q8IYR6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.3■■□□□ 1.64
TMEFF1Q8IYR6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.3■■□□□ 1.64
TMEFF1Q8IYR6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TMEFF1Q8IYR6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TMEFF1Q8IYR6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TMEFF1Q8IYR6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.3■■□□□ 1.64
TMEFF1Q8IYR6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TMEFF1Q8IYR6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms