Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.77■■■□□ 2.68
SLX4Q8IY92 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
SLX4Q8IY92 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SLX4Q8IY92 ATP5G2P3-201ENST00000429083 425 ntBASIC31.77■■■□□ 2.68
SLX4Q8IY92 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.76■■■□□ 2.67
SLX4Q8IY92 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SLX4Q8IY92 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SLX4Q8IY92 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SLX4Q8IY92 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.75■■■□□ 2.67
SLX4Q8IY92 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.75■■■□□ 2.67
SLX4Q8IY92 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SLX4Q8IY92 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SLX4Q8IY92 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.74■■■□□ 2.67
SLX4Q8IY92 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SLX4Q8IY92 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.73■■■□□ 2.67
SLX4Q8IY92 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.72■■■□□ 2.67
SLX4Q8IY92 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SLX4Q8IY92 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.72■■■□□ 2.67
SLX4Q8IY92 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SLX4Q8IY92 AL157400.5-201ENST00000507624 621 ntBASIC31.72■■■□□ 2.67
SLX4Q8IY92 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
SLX4Q8IY92 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SLX4Q8IY92 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SLX4Q8IY92 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.7■■■□□ 2.67
SLX4Q8IY92 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SLX4Q8IY92 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.66
SLX4Q8IY92 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
SLX4Q8IY92 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
SLX4Q8IY92 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.69■■■□□ 2.66
SLX4Q8IY92 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SLX4Q8IY92 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.69■■■□□ 2.66
SLX4Q8IY92 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SLX4Q8IY92 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SLX4Q8IY92 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SLX4Q8IY92 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SLX4Q8IY92 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SLX4Q8IY92 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SLX4Q8IY92 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SLX4Q8IY92 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SLX4Q8IY92 ECEL1P2-201ENST00000461596 1295 ntBASIC31.63■■■□□ 2.65
SLX4Q8IY92 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.63■■■□□ 2.65
SLX4Q8IY92 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
SLX4Q8IY92 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SLX4Q8IY92 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SLX4Q8IY92 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
SLX4Q8IY92 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.62■■■□□ 2.65
SLX4Q8IY92 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SLX4Q8IY92 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.62■■■□□ 2.65
SLX4Q8IY92 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SLX4Q8IY92 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
SLX4Q8IY92 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SLX4Q8IY92 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SLX4Q8IY92 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SLX4Q8IY92 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SLX4Q8IY92 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SLX4Q8IY92 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.59■■■□□ 2.65
SLX4Q8IY92 AL135925.1-201ENST00000605920 1701 ntBASIC31.59■■■□□ 2.65
SLX4Q8IY92 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SLX4Q8IY92 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SLX4Q8IY92 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.57■■■□□ 2.64
SLX4Q8IY92 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
SLX4Q8IY92 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
SLX4Q8IY92 AC129492.7-201ENST00000622992 756 ntBASIC31.56■■■□□ 2.64
SLX4Q8IY92 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SLX4Q8IY92 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SLX4Q8IY92 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.55■■■□□ 2.64
SLX4Q8IY92 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SLX4Q8IY92 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SLX4Q8IY92 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.53■■■□□ 2.64
SLX4Q8IY92 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.53■■■□□ 2.64
SLX4Q8IY92 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
SLX4Q8IY92 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
SLX4Q8IY92 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.52■■■□□ 2.64
SLX4Q8IY92 AL451085.2-201ENST00000605085 799 ntBASIC31.52■■■□□ 2.64
SLX4Q8IY92 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLX4Q8IY92 AL592293.1-201ENST00000502889 1188 ntBASIC31.52■■■□□ 2.64
SLX4Q8IY92 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SLX4Q8IY92 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
SLX4Q8IY92 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SLX4Q8IY92 AC007029.1-201ENST00000604183 313 ntBASIC31.5■■■□□ 2.63
SLX4Q8IY92 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
SLX4Q8IY92 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SLX4Q8IY92 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.49■■■□□ 2.63
SLX4Q8IY92 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SLX4Q8IY92 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.48■■■□□ 2.63
SLX4Q8IY92 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SLX4Q8IY92 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SLX4Q8IY92 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SLX4Q8IY92 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.46■■■□□ 2.63
SLX4Q8IY92 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SLX4Q8IY92 AC009831.1-201ENST00000580420 1582 ntBASIC31.45■■■□□ 2.63
SLX4Q8IY92 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.45■■■□□ 2.62
SLX4Q8IY92 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.45■■■□□ 2.62
SLX4Q8IY92 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.44■■■□□ 2.62
SLX4Q8IY92 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
SLX4Q8IY92 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLX4Q8IY92 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
SLX4Q8IY92 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SLX4Q8IY92 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SLX4Q8IY92 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms