Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RNF135Q8IUD6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF135Q8IUD6 AC060814.1-201ENST00000554326 538 ntBASIC26.92■■□□□ 1.9
RNF135Q8IUD6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF135Q8IUD6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.91■■□□□ 1.9
RNF135Q8IUD6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF135Q8IUD6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
RNF135Q8IUD6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.9■■□□□ 1.9
RNF135Q8IUD6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
RNF135Q8IUD6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RNF135Q8IUD6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.89■■□□□ 1.9
RNF135Q8IUD6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF135Q8IUD6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF135Q8IUD6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.88■■□□□ 1.89
RNF135Q8IUD6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF135Q8IUD6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RNF135Q8IUD6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF135Q8IUD6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF135Q8IUD6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF135Q8IUD6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RNF135Q8IUD6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF135Q8IUD6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF135Q8IUD6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
RNF135Q8IUD6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF135Q8IUD6 AC019069.1-201ENST00000610008 1333 ntBASIC26.84■■□□□ 1.89
RNF135Q8IUD6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.84■■□□□ 1.89
RNF135Q8IUD6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RNF135Q8IUD6 ABCB10P1-201ENST00000614297 2181 ntBASIC26.83■■□□□ 1.89
RNF135Q8IUD6 AL592295.1-201ENST00000400984 884 ntBASIC26.83■■□□□ 1.89
RNF135Q8IUD6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.83■■□□□ 1.89
RNF135Q8IUD6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RNF135Q8IUD6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.82■■□□□ 1.88
RNF135Q8IUD6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF135Q8IUD6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF135Q8IUD6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
RNF135Q8IUD6 AL035685.1-201ENST00000636663 812 ntBASIC26.8■■□□□ 1.88
RNF135Q8IUD6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RNF135Q8IUD6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF135Q8IUD6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.79■■□□□ 1.88
RNF135Q8IUD6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF135Q8IUD6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RNF135Q8IUD6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RNF135Q8IUD6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.78■■□□□ 1.88
RNF135Q8IUD6 AL135925.1-201ENST00000605920 1701 ntBASIC26.77■■□□□ 1.88
RNF135Q8IUD6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RNF135Q8IUD6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.77■■□□□ 1.88
RNF135Q8IUD6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.77■■□□□ 1.88
RNF135Q8IUD6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.76■■□□□ 1.87
RNF135Q8IUD6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.76■■□□□ 1.87
RNF135Q8IUD6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.76■■□□□ 1.87
RNF135Q8IUD6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RNF135Q8IUD6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RNF135Q8IUD6 AC092296.2-201ENST00000589470 999 ntBASIC26.75■■□□□ 1.87
RNF135Q8IUD6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RNF135Q8IUD6 AC010864.1-201ENST00000609407 1511 ntBASIC26.75■■□□□ 1.87
RNF135Q8IUD6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 AC148477.6-201ENST00000623746 465 ntBASIC26.72■■□□□ 1.87
RNF135Q8IUD6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RNF135Q8IUD6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.71■■□□□ 1.87
RNF135Q8IUD6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
RNF135Q8IUD6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RNF135Q8IUD6 AL451085.2-201ENST00000605085 799 ntBASIC26.7■■□□□ 1.86
RNF135Q8IUD6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RNF135Q8IUD6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
RNF135Q8IUD6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF135Q8IUD6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
RNF135Q8IUD6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RNF135Q8IUD6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms