Protein–RNA interactions for Protein: Q8CFI2

Cdc34, Ubiquitin-conjugating enzyme E2 R1, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc34Q8CFI2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdc34Q8CFI2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Cdc34Q8CFI2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Cdc34Q8CFI2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdc34Q8CFI2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdc34Q8CFI2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdc34Q8CFI2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdc34Q8CFI2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdc34Q8CFI2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdc34Q8CFI2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdc34Q8CFI2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdc34Q8CFI2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdc34Q8CFI2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdc34Q8CFI2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cdc34Q8CFI2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdc34Q8CFI2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdc34Q8CFI2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdc34Q8CFI2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Cdc34Q8CFI2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdc34Q8CFI2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdc34Q8CFI2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdc34Q8CFI2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.47■□□□□ 0.55
Cdc34Q8CFI2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdc34Q8CFI2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cdc34Q8CFI2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Cdc34Q8CFI2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdc34Q8CFI2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc34Q8CFI2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc34Q8CFI2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc34Q8CFI2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc34Q8CFI2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc34Q8CFI2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc34Q8CFI2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Gm26115-201ENSMUST00000175605 87 ntBASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc34Q8CFI2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdc34Q8CFI2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdc34Q8CFI2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc34Q8CFI2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdc34Q8CFI2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms