Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
Ptcd1Q8C2E4 Gm45364-201ENSMUST00000210883 159 ntBASIC29.07■■■□□ 2.24
Ptcd1Q8C2E4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ptcd1Q8C2E4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ptcd1Q8C2E4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ptcd1Q8C2E4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Ptcd1Q8C2E4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Ptcd1Q8C2E4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ptcd1Q8C2E4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ptcd1Q8C2E4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ptcd1Q8C2E4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ptcd1Q8C2E4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Ptcd1Q8C2E4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ptcd1Q8C2E4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ptcd1Q8C2E4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Ptcd1Q8C2E4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.02■■■□□ 2.24
Ptcd1Q8C2E4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ptcd1Q8C2E4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ptcd1Q8C2E4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ptcd1Q8C2E4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ptcd1Q8C2E4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Ptcd1Q8C2E4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ptcd1Q8C2E4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC28.98■■■□□ 2.23
Ptcd1Q8C2E4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
Ptcd1Q8C2E4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.96■■■□□ 2.23
Ptcd1Q8C2E4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ptcd1Q8C2E4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
Ptcd1Q8C2E4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
Ptcd1Q8C2E4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Ptcd1Q8C2E4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Ptcd1Q8C2E4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.94■■■□□ 2.22
Ptcd1Q8C2E4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ptcd1Q8C2E4 Gm14523-201ENSMUST00000117260 558 ntBASIC28.94■■■□□ 2.22
Ptcd1Q8C2E4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Ptcd1Q8C2E4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Ptcd1Q8C2E4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Ptcd1Q8C2E4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
Ptcd1Q8C2E4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ptcd1Q8C2E4 Gm22567-201ENSMUST00000175542 342 ntBASIC28.91■■■□□ 2.22
Ptcd1Q8C2E4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ptcd1Q8C2E4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC28.89■■■□□ 2.22
Ptcd1Q8C2E4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.89■■■□□ 2.21
Ptcd1Q8C2E4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ptcd1Q8C2E4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.88■■■□□ 2.21
Ptcd1Q8C2E4 Gm5067-201ENSMUST00000170449 1009 ntBASIC28.87■■■□□ 2.21
Ptcd1Q8C2E4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ptcd1Q8C2E4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ptcd1Q8C2E4 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.84■■■□□ 2.21
Ptcd1Q8C2E4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ptcd1Q8C2E4 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.84■■■□□ 2.21
Ptcd1Q8C2E4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.83■■■□□ 2.21
Ptcd1Q8C2E4 Gm37136-201ENSMUST00000194368 194 ntBASIC28.83■■■□□ 2.21
Ptcd1Q8C2E4 Gm5812-201ENSMUST00000061073 957 ntBASIC28.83■■■□□ 2.21
Ptcd1Q8C2E4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ptcd1Q8C2E4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ptcd1Q8C2E4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ptcd1Q8C2E4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
Ptcd1Q8C2E4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Ptcd1Q8C2E4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
Ptcd1Q8C2E4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ptcd1Q8C2E4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ptcd1Q8C2E4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ptcd1Q8C2E4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Ptcd1Q8C2E4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ptcd1Q8C2E4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.77■■■□□ 2.2
Ptcd1Q8C2E4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.77■■■□□ 2.2
Ptcd1Q8C2E4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ptcd1Q8C2E4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.76■■■□□ 2.2
Ptcd1Q8C2E4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.76■■■□□ 2.19
Ptcd1Q8C2E4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ptcd1Q8C2E4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Ptcd1Q8C2E4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Ptcd1Q8C2E4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Ptcd1Q8C2E4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ptcd1Q8C2E4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC28.75■■■□□ 2.19
Ptcd1Q8C2E4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Ptcd1Q8C2E4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ptcd1Q8C2E4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Ptcd1Q8C2E4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ptcd1Q8C2E4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ptcd1Q8C2E4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC28.73■■■□□ 2.19
Ptcd1Q8C2E4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ptcd1Q8C2E4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ptcd1Q8C2E4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ptcd1Q8C2E4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ptcd1Q8C2E4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Ptcd1Q8C2E4 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.72■■■□□ 2.19
Ptcd1Q8C2E4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Ptcd1Q8C2E4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ptcd1Q8C2E4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ptcd1Q8C2E4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ptcd1Q8C2E4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Ptcd1Q8C2E4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Ptcd1Q8C2E4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.68■■■□□ 2.18
Ptcd1Q8C2E4 Gm10420-201ENSMUST00000121713 882 ntBASIC28.67■■■□□ 2.18
Ptcd1Q8C2E4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC28.67■■■□□ 2.18
Ptcd1Q8C2E4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Ptcd1Q8C2E4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ptcd1Q8C2E4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Ptcd1Q8C2E4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms