Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trnp1Q80ZI1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trnp1Q80ZI1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Trnp1Q80ZI1 Gm9812-201ENSMUST00000061934 968 ntBASIC27.15■■□□□ 1.94
Trnp1Q80ZI1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Trnp1Q80ZI1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Trnp1Q80ZI1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Trnp1Q80ZI1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Trnp1Q80ZI1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.13■■□□□ 1.93
Trnp1Q80ZI1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.13■■□□□ 1.93
Trnp1Q80ZI1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Trnp1Q80ZI1 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.13■■□□□ 1.93
Trnp1Q80ZI1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Trnp1Q80ZI1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.12■■□□□ 1.93
Trnp1Q80ZI1 Gm22567-201ENSMUST00000175542 342 ntBASIC27.12■■□□□ 1.93
Trnp1Q80ZI1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trnp1Q80ZI1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Trnp1Q80ZI1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trnp1Q80ZI1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Trnp1Q80ZI1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.11■■□□□ 1.93
Trnp1Q80ZI1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.11■■□□□ 1.93
Trnp1Q80ZI1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trnp1Q80ZI1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trnp1Q80ZI1 Gm10420-201ENSMUST00000121713 882 ntBASIC27.1■■□□□ 1.93
Trnp1Q80ZI1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Trnp1Q80ZI1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Trnp1Q80ZI1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.1■■□□□ 1.93
Trnp1Q80ZI1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
Trnp1Q80ZI1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Trnp1Q80ZI1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Trnp1Q80ZI1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Trnp1Q80ZI1 Gm5921-201ENSMUST00000075898 882 ntBASIC27.09■■□□□ 1.93
Trnp1Q80ZI1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trnp1Q80ZI1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.08■■□□□ 1.93
Trnp1Q80ZI1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Trnp1Q80ZI1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trnp1Q80ZI1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trnp1Q80ZI1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trnp1Q80ZI1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trnp1Q80ZI1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.07■■□□□ 1.92
Trnp1Q80ZI1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.06■■□□□ 1.92
Trnp1Q80ZI1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.06■■□□□ 1.92
Trnp1Q80ZI1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Trnp1Q80ZI1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Trnp1Q80ZI1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trnp1Q80ZI1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Trnp1Q80ZI1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Trnp1Q80ZI1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trnp1Q80ZI1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trnp1Q80ZI1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Trnp1Q80ZI1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trnp1Q80ZI1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trnp1Q80ZI1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.03■■□□□ 1.92
Trnp1Q80ZI1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trnp1Q80ZI1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Trnp1Q80ZI1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Trnp1Q80ZI1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27■■□□□ 1.91
Trnp1Q80ZI1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27■■□□□ 1.91
Trnp1Q80ZI1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27■■□□□ 1.91
Trnp1Q80ZI1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trnp1Q80ZI1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trnp1Q80ZI1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.99■■□□□ 1.91
Trnp1Q80ZI1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trnp1Q80ZI1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
Trnp1Q80ZI1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trnp1Q80ZI1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trnp1Q80ZI1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.97■■□□□ 1.91
Trnp1Q80ZI1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trnp1Q80ZI1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trnp1Q80ZI1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Trnp1Q80ZI1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
Trnp1Q80ZI1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.96■■□□□ 1.91
Trnp1Q80ZI1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Trnp1Q80ZI1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trnp1Q80ZI1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Trnp1Q80ZI1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trnp1Q80ZI1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.92■■□□□ 1.9
Trnp1Q80ZI1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Trnp1Q80ZI1 Gm15546-201ENSMUST00000122095 826 ntBASIC26.92■■□□□ 1.9
Trnp1Q80ZI1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Trnp1Q80ZI1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trnp1Q80ZI1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Trnp1Q80ZI1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trnp1Q80ZI1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Trnp1Q80ZI1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trnp1Q80ZI1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trnp1Q80ZI1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trnp1Q80ZI1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.88■■□□□ 1.89
Trnp1Q80ZI1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trnp1Q80ZI1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Trnp1Q80ZI1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trnp1Q80ZI1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trnp1Q80ZI1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Trnp1Q80ZI1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trnp1Q80ZI1 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.86■■□□□ 1.89
Trnp1Q80ZI1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trnp1Q80ZI1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trnp1Q80ZI1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Trnp1Q80ZI1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trnp1Q80ZI1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms