Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Zc3hc1Q80YV2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3hc1Q80YV2 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.2■□□□□ 0.98
Zc3hc1Q80YV2 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.2■□□□□ 0.98
Zc3hc1Q80YV2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3hc1Q80YV2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.18■□□□□ 0.98
Zc3hc1Q80YV2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.18■□□□□ 0.98
Zc3hc1Q80YV2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3hc1Q80YV2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3hc1Q80YV2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3hc1Q80YV2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3hc1Q80YV2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Particl-201ENSMUST00000205370 1560 ntBASIC21.15■□□□□ 0.98
Zc3hc1Q80YV2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3hc1Q80YV2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Zc3hc1Q80YV2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.15■□□□□ 0.98
Zc3hc1Q80YV2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Zc3hc1Q80YV2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Zc3hc1Q80YV2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Zc3hc1Q80YV2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3hc1Q80YV2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3hc1Q80YV2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 Zfp131-205ENSMUST00000223812 663 ntBASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Gm30023-201ENSMUST00000197970 889 ntBASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3hc1Q80YV2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Zc3hc1Q80YV2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Zc3hc1Q80YV2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3hc1Q80YV2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3hc1Q80YV2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3hc1Q80YV2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Gm24970-201ENSMUST00000175582 82 ntBASIC21.05■□□□□ 0.96
Zc3hc1Q80YV2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Zc3hc1Q80YV2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3hc1Q80YV2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.04■□□□□ 0.96
Zc3hc1Q80YV2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3hc1Q80YV2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3hc1Q80YV2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Gm9397-201ENSMUST00000200125 605 ntBASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Zc3hc1Q80YV2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.02■□□□□ 0.96
Zc3hc1Q80YV2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Zc3hc1Q80YV2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Zc3hc1Q80YV2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Zc3hc1Q80YV2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Zc3hc1Q80YV2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zc3hc1Q80YV2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zc3hc1Q80YV2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.99■□□□□ 0.95
Zc3hc1Q80YV2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.99■□□□□ 0.95
Zc3hc1Q80YV2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zc3hc1Q80YV2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Zc3hc1Q80YV2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zc3hc1Q80YV2 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.96■□□□□ 0.95
Zc3hc1Q80YV2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zc3hc1Q80YV2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zc3hc1Q80YV2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zc3hc1Q80YV2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Zc3hc1Q80YV2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Zc3hc1Q80YV2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms