Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ttc28Q80XJ3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.82
Ttc28Q80XJ3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ttc28Q80XJ3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc28Q80XJ3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.14■□□□□ 0.81
Ttc28Q80XJ3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc28Q80XJ3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc28Q80XJ3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc28Q80XJ3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc28Q80XJ3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc28Q80XJ3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.13■□□□□ 0.81
Ttc28Q80XJ3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc28Q80XJ3 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.13■□□□□ 0.81
Ttc28Q80XJ3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.12■□□□□ 0.81
Ttc28Q80XJ3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.12■□□□□ 0.81
Ttc28Q80XJ3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.12■□□□□ 0.81
Ttc28Q80XJ3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.12■□□□□ 0.81
Ttc28Q80XJ3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc28Q80XJ3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc28Q80XJ3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc28Q80XJ3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.11■□□□□ 0.81
Ttc28Q80XJ3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.11■□□□□ 0.81
Ttc28Q80XJ3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.1■□□□□ 0.81
Ttc28Q80XJ3 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.1■□□□□ 0.81
Ttc28Q80XJ3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ttc28Q80XJ3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.09■□□□□ 0.81
Ttc28Q80XJ3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ttc28Q80XJ3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ttc28Q80XJ3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ttc28Q80XJ3 Gm15546-201ENSMUST00000122095 826 ntBASIC20.07■□□□□ 0.8
Ttc28Q80XJ3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ttc28Q80XJ3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ttc28Q80XJ3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc28Q80XJ3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc28Q80XJ3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc28Q80XJ3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ttc28Q80XJ3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.04■□□□□ 0.8
Ttc28Q80XJ3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.04■□□□□ 0.8
Ttc28Q80XJ3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ttc28Q80XJ3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ttc28Q80XJ3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.03■□□□□ 0.8
Ttc28Q80XJ3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ttc28Q80XJ3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ttc28Q80XJ3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ttc28Q80XJ3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ttc28Q80XJ3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ttc28Q80XJ3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ttc28Q80XJ3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ttc28Q80XJ3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ttc28Q80XJ3 Gm9812-201ENSMUST00000061934 968 ntBASIC20.02■□□□□ 0.8
Ttc28Q80XJ3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ttc28Q80XJ3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ttc28Q80XJ3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ttc28Q80XJ3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ttc28Q80XJ3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.01■□□□□ 0.79
Ttc28Q80XJ3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ttc28Q80XJ3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ttc28Q80XJ3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ttc28Q80XJ3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ttc28Q80XJ3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ttc28Q80XJ3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.99■□□□□ 0.79
Ttc28Q80XJ3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.99■□□□□ 0.79
Ttc28Q80XJ3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ttc28Q80XJ3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ttc28Q80XJ3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.98■□□□□ 0.79
Ttc28Q80XJ3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.98■□□□□ 0.79
Ttc28Q80XJ3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ttc28Q80XJ3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.98■□□□□ 0.79
Ttc28Q80XJ3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ttc28Q80XJ3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ttc28Q80XJ3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ttc28Q80XJ3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ttc28Q80XJ3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ttc28Q80XJ3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ttc28Q80XJ3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ttc28Q80XJ3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ttc28Q80XJ3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ttc28Q80XJ3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ttc28Q80XJ3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ttc28Q80XJ3 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.95■□□□□ 0.78
Ttc28Q80XJ3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.94■□□□□ 0.78
Ttc28Q80XJ3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc28Q80XJ3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ttc28Q80XJ3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc28Q80XJ3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ttc28Q80XJ3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.93■□□□□ 0.78
Ttc28Q80XJ3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ttc28Q80XJ3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ttc28Q80XJ3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ttc28Q80XJ3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ttc28Q80XJ3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ttc28Q80XJ3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ttc28Q80XJ3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ttc28Q80XJ3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ttc28Q80XJ3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.92■□□□□ 0.78
Ttc28Q80XJ3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ttc28Q80XJ3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ttc28Q80XJ3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ttc28Q80XJ3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.91■□□□□ 0.78
Ttc28Q80XJ3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms