Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDHR3Q6ZTQ4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDHR3Q6ZTQ4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.51■■□□□ 1.67
CDHR3Q6ZTQ4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDHR3Q6ZTQ4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDHR3Q6ZTQ4 LINC01003-201ENST00000564834 1764 ntBASIC25.5■■□□□ 1.67
CDHR3Q6ZTQ4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDHR3Q6ZTQ4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.49■■□□□ 1.67
CDHR3Q6ZTQ4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.49■■□□□ 1.67
CDHR3Q6ZTQ4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDHR3Q6ZTQ4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.49■■□□□ 1.67
CDHR3Q6ZTQ4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDHR3Q6ZTQ4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CDHR3Q6ZTQ4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDHR3Q6ZTQ4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.48■■□□□ 1.67
CDHR3Q6ZTQ4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDHR3Q6ZTQ4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDHR3Q6ZTQ4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDHR3Q6ZTQ4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDHR3Q6ZTQ4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.47■■□□□ 1.67
CDHR3Q6ZTQ4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.47■■□□□ 1.67
CDHR3Q6ZTQ4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDHR3Q6ZTQ4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDHR3Q6ZTQ4 AC100797.4-201ENST00000631653 1827 ntBASIC25.45■■□□□ 1.66
CDHR3Q6ZTQ4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDHR3Q6ZTQ4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDHR3Q6ZTQ4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CDHR3Q6ZTQ4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDHR3Q6ZTQ4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDHR3Q6ZTQ4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.45■■□□□ 1.66
CDHR3Q6ZTQ4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
CDHR3Q6ZTQ4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDHR3Q6ZTQ4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDHR3Q6ZTQ4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
CDHR3Q6ZTQ4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CDHR3Q6ZTQ4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDHR3Q6ZTQ4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CDHR3Q6ZTQ4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDHR3Q6ZTQ4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.41■■□□□ 1.66
CDHR3Q6ZTQ4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDHR3Q6ZTQ4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDHR3Q6ZTQ4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.41■■□□□ 1.66
CDHR3Q6ZTQ4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.4■■□□□ 1.66
CDHR3Q6ZTQ4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.4■■□□□ 1.66
CDHR3Q6ZTQ4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDHR3Q6ZTQ4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CDHR3Q6ZTQ4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.39■■□□□ 1.66
CDHR3Q6ZTQ4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CDHR3Q6ZTQ4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.39■■□□□ 1.65
CDHR3Q6ZTQ4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CDHR3Q6ZTQ4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.38■■□□□ 1.65
CDHR3Q6ZTQ4 ABHD17AP4-201ENST00000411545 909 ntBASIC25.38■■□□□ 1.65
CDHR3Q6ZTQ4 MIR6090-201ENST00000622481 60 ntBASIC25.38■■□□□ 1.65
CDHR3Q6ZTQ4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CDHR3Q6ZTQ4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CDHR3Q6ZTQ4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.38■■□□□ 1.65
CDHR3Q6ZTQ4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR3Q6ZTQ4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR3Q6ZTQ4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR3Q6ZTQ4 AC108673.1-201ENST00000510422 1159 ntBASIC25.37■■□□□ 1.65
CDHR3Q6ZTQ4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
CDHR3Q6ZTQ4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CDHR3Q6ZTQ4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.37■■□□□ 1.65
CDHR3Q6ZTQ4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR3Q6ZTQ4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
CDHR3Q6ZTQ4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.36■■□□□ 1.65
CDHR3Q6ZTQ4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDHR3Q6ZTQ4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
CDHR3Q6ZTQ4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDHR3Q6ZTQ4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.35■■□□□ 1.65
CDHR3Q6ZTQ4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDHR3Q6ZTQ4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.34■■□□□ 1.65
CDHR3Q6ZTQ4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDHR3Q6ZTQ4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDHR3Q6ZTQ4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDHR3Q6ZTQ4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.33■■□□□ 1.65
CDHR3Q6ZTQ4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.33■■□□□ 1.65
CDHR3Q6ZTQ4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDHR3Q6ZTQ4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.32■■□□□ 1.64
CDHR3Q6ZTQ4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDHR3Q6ZTQ4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.31■■□□□ 1.64
CDHR3Q6ZTQ4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDHR3Q6ZTQ4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDHR3Q6ZTQ4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CDHR3Q6ZTQ4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDHR3Q6ZTQ4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CDHR3Q6ZTQ4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
CDHR3Q6ZTQ4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.29■■□□□ 1.64
CDHR3Q6ZTQ4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.29■■□□□ 1.64
CDHR3Q6ZTQ4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.29■■□□□ 1.64
CDHR3Q6ZTQ4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.28■■□□□ 1.64
CDHR3Q6ZTQ4 DUX4L29-201ENST00000425409 679 ntBASIC25.28■■□□□ 1.64
CDHR3Q6ZTQ4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDHR3Q6ZTQ4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CDHR3Q6ZTQ4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDHR3Q6ZTQ4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.27■■□□□ 1.64
CDHR3Q6ZTQ4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CDHR3Q6ZTQ4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDHR3Q6ZTQ4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.27■■□□□ 1.64
CDHR3Q6ZTQ4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms