Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TREML4Q6UXN2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TREML4Q6UXN2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TREML4Q6UXN2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TREML4Q6UXN2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TREML4Q6UXN2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TREML4Q6UXN2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TREML4Q6UXN2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TREML4Q6UXN2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TREML4Q6UXN2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.62■□□□□ 0.89
TREML4Q6UXN2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TREML4Q6UXN2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TREML4Q6UXN2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TREML4Q6UXN2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TREML4Q6UXN2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.61■□□□□ 0.89
TREML4Q6UXN2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TREML4Q6UXN2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TREML4Q6UXN2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.61■□□□□ 0.89
TREML4Q6UXN2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TREML4Q6UXN2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TREML4Q6UXN2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TREML4Q6UXN2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TREML4Q6UXN2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TREML4Q6UXN2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TREML4Q6UXN2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TREML4Q6UXN2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TREML4Q6UXN2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TREML4Q6UXN2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TREML4Q6UXN2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TREML4Q6UXN2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.58■□□□□ 0.89
TREML4Q6UXN2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.58■□□□□ 0.89
TREML4Q6UXN2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TREML4Q6UXN2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.58■□□□□ 0.89
TREML4Q6UXN2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
TREML4Q6UXN2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
TREML4Q6UXN2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TREML4Q6UXN2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TREML4Q6UXN2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TREML4Q6UXN2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.56■□□□□ 0.88
TREML4Q6UXN2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TREML4Q6UXN2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TREML4Q6UXN2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TREML4Q6UXN2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TREML4Q6UXN2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TREML4Q6UXN2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TREML4Q6UXN2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TREML4Q6UXN2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TREML4Q6UXN2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TREML4Q6UXN2 DUX4L13-201ENST00000554103 1267 ntBASIC20.55■□□□□ 0.88
TREML4Q6UXN2 DUX4L15-201ENST00000611059 1267 ntBASIC20.55■□□□□ 0.88
TREML4Q6UXN2 DUX4L23-201ENST00000615195 1269 ntBASIC20.55■□□□□ 0.88
TREML4Q6UXN2 DUX4L24-201ENST00000617576 1269 ntBASIC20.55■□□□□ 0.88
TREML4Q6UXN2 DUX4L22-201ENST00000618238 1269 ntBASIC20.55■□□□□ 0.88
TREML4Q6UXN2 DUX4L20-201ENST00000619712 1269 ntBASIC20.55■□□□□ 0.88
TREML4Q6UXN2 DUX4L21-201ENST00000622058 1269 ntBASIC20.55■□□□□ 0.88
TREML4Q6UXN2 DUX4L10-201ENST00000622460 1267 ntBASIC20.55■□□□□ 0.88
TREML4Q6UXN2 DUX4L25-201ENST00000624915 1269 ntBASIC20.55■□□□□ 0.88
TREML4Q6UXN2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TREML4Q6UXN2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TREML4Q6UXN2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.55■□□□□ 0.88
TREML4Q6UXN2 AC010864.1-201ENST00000609407 1511 ntBASIC20.54■□□□□ 0.88
TREML4Q6UXN2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.54■□□□□ 0.88
TREML4Q6UXN2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TREML4Q6UXN2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.54■□□□□ 0.88
TREML4Q6UXN2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TREML4Q6UXN2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TREML4Q6UXN2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
TREML4Q6UXN2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.53■□□□□ 0.88
TREML4Q6UXN2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TREML4Q6UXN2 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.52■□□□□ 0.88
TREML4Q6UXN2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREML4Q6UXN2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TREML4Q6UXN2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.5■□□□□ 0.87
TREML4Q6UXN2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.5■□□□□ 0.87
TREML4Q6UXN2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TREML4Q6UXN2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TREML4Q6UXN2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.49■□□□□ 0.87
TREML4Q6UXN2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.49■□□□□ 0.87
TREML4Q6UXN2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TREML4Q6UXN2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TREML4Q6UXN2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TREML4Q6UXN2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TREML4Q6UXN2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TREML4Q6UXN2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.48■□□□□ 0.87
TREML4Q6UXN2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TREML4Q6UXN2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TREML4Q6UXN2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms