Protein–RNA interactions for Protein: Q6UB35

MTHFD1L, Monofunctional C1-tetrahydrofolate synthase, mitochondrial, humanhuman

Predictions only

Length 978 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1LQ6UB35 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
MTHFD1LQ6UB35 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
MTHFD1LQ6UB35 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
MTHFD1LQ6UB35 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.29■■■□□ 2.12
MTHFD1LQ6UB35 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.29■■■□□ 2.12
MTHFD1LQ6UB35 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.29■■■□□ 2.12
MTHFD1LQ6UB35 AP004833.2-201ENST00000532228 1454 ntBASIC28.28■■■□□ 2.12
MTHFD1LQ6UB35 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
MTHFD1LQ6UB35 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.28■■■□□ 2.12
MTHFD1LQ6UB35 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.28■■■□□ 2.12
MTHFD1LQ6UB35 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
MTHFD1LQ6UB35 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
MTHFD1LQ6UB35 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
MTHFD1LQ6UB35 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.27■■■□□ 2.12
MTHFD1LQ6UB35 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.27■■■□□ 2.12
MTHFD1LQ6UB35 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
MTHFD1LQ6UB35 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
MTHFD1LQ6UB35 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.26■■■□□ 2.11
MTHFD1LQ6UB35 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.26■■■□□ 2.11
MTHFD1LQ6UB35 AC148477.6-201ENST00000623746 465 ntBASIC28.26■■■□□ 2.11
MTHFD1LQ6UB35 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
MTHFD1LQ6UB35 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
MTHFD1LQ6UB35 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
MTHFD1LQ6UB35 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
MTHFD1LQ6UB35 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
MTHFD1LQ6UB35 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.24■■■□□ 2.11
MTHFD1LQ6UB35 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
MTHFD1LQ6UB35 RARRES2P2-201ENST00000394842 485 ntBASIC28.24■■■□□ 2.11
MTHFD1LQ6UB35 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.24■■■□□ 2.11
MTHFD1LQ6UB35 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
MTHFD1LQ6UB35 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
MTHFD1LQ6UB35 AC022413.1-201ENST00000624602 984 ntBASIC28.23■■■□□ 2.11
MTHFD1LQ6UB35 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
MTHFD1LQ6UB35 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
MTHFD1LQ6UB35 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
MTHFD1LQ6UB35 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
MTHFD1LQ6UB35 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
MTHFD1LQ6UB35 RNF126P1-201ENST00000567452 1320 ntBASIC28.2■■■□□ 2.11
MTHFD1LQ6UB35 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.19■■■□□ 2.1
MTHFD1LQ6UB35 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
MTHFD1LQ6UB35 MIR219A2-201ENST00000608502 1504 ntBASIC28.18■■■□□ 2.1
MTHFD1LQ6UB35 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.18■■■□□ 2.1
MTHFD1LQ6UB35 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
MTHFD1LQ6UB35 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
MTHFD1LQ6UB35 AC100797.4-201ENST00000631653 1827 ntBASIC28.18■■■□□ 2.1
MTHFD1LQ6UB35 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.17■■■□□ 2.1
MTHFD1LQ6UB35 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
MTHFD1LQ6UB35 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.17■■■□□ 2.1
MTHFD1LQ6UB35 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.17■■■□□ 2.1
MTHFD1LQ6UB35 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
MTHFD1LQ6UB35 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
MTHFD1LQ6UB35 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
MTHFD1LQ6UB35 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
MTHFD1LQ6UB35 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
MTHFD1LQ6UB35 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.16■■■□□ 2.1
MTHFD1LQ6UB35 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
MTHFD1LQ6UB35 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.14■■■□□ 2.1
MTHFD1LQ6UB35 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
MTHFD1LQ6UB35 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.14■■■□□ 2.1
MTHFD1LQ6UB35 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
MTHFD1LQ6UB35 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.14■■■□□ 2.1
MTHFD1LQ6UB35 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.12■■■□□ 2.09
MTHFD1LQ6UB35 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
MTHFD1LQ6UB35 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
MTHFD1LQ6UB35 AL139393.2-201ENST00000608721 2025 ntBASIC28.12■■■□□ 2.09
MTHFD1LQ6UB35 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
MTHFD1LQ6UB35 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
MTHFD1LQ6UB35 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
MTHFD1LQ6UB35 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.1■■■□□ 2.09
MTHFD1LQ6UB35 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
MTHFD1LQ6UB35 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
MTHFD1LQ6UB35 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.09■■■□□ 2.09
MTHFD1LQ6UB35 ABHD17AP5-201ENST00000580133 923 ntBASIC28.09■■■□□ 2.09
MTHFD1LQ6UB35 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
MTHFD1LQ6UB35 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
MTHFD1LQ6UB35 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.08■■■□□ 2.09
MTHFD1LQ6UB35 AC060814.1-201ENST00000554326 538 ntBASIC28.08■■■□□ 2.09
MTHFD1LQ6UB35 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
MTHFD1LQ6UB35 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.08■■■□□ 2.09
MTHFD1LQ6UB35 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
MTHFD1LQ6UB35 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.07■■■□□ 2.08
MTHFD1LQ6UB35 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MTHFD1LQ6UB35 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
MTHFD1LQ6UB35 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
MTHFD1LQ6UB35 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MTHFD1LQ6UB35 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
MTHFD1LQ6UB35 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
MTHFD1LQ6UB35 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
MTHFD1LQ6UB35 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
MTHFD1LQ6UB35 ABCB10P1-201ENST00000614297 2181 ntBASIC28.04■■■□□ 2.08
MTHFD1LQ6UB35 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.04■■■□□ 2.08
MTHFD1LQ6UB35 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.04■■■□□ 2.08
MTHFD1LQ6UB35 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.04■■■□□ 2.08
MTHFD1LQ6UB35 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
MTHFD1LQ6UB35 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
MTHFD1LQ6UB35 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.02■■■□□ 2.08
MTHFD1LQ6UB35 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.02■■■□□ 2.08
MTHFD1LQ6UB35 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
MTHFD1LQ6UB35 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.01■■■□□ 2.07
MTHFD1LQ6UB35 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms