Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim45Q6PFY8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim45Q6PFY8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Trim45Q6PFY8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Trim45Q6PFY8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Trim45Q6PFY8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim45Q6PFY8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim45Q6PFY8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.82■■□□□ 1.08
Trim45Q6PFY8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim45Q6PFY8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Trim45Q6PFY8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim45Q6PFY8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim45Q6PFY8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.79■■□□□ 1.08
Trim45Q6PFY8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim45Q6PFY8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim45Q6PFY8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Trim45Q6PFY8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim45Q6PFY8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim45Q6PFY8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim45Q6PFY8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim45Q6PFY8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim45Q6PFY8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim45Q6PFY8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim45Q6PFY8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim45Q6PFY8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim45Q6PFY8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim45Q6PFY8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Trim45Q6PFY8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Trim45Q6PFY8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim45Q6PFY8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim45Q6PFY8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim45Q6PFY8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim45Q6PFY8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.72■■□□□ 1.07
Trim45Q6PFY8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trim45Q6PFY8 Particl-201ENSMUST00000205370 1560 ntBASIC21.72■■□□□ 1.07
Trim45Q6PFY8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim45Q6PFY8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim45Q6PFY8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.71■■□□□ 1.07
Trim45Q6PFY8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trim45Q6PFY8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim45Q6PFY8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim45Q6PFY8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trim45Q6PFY8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Trim45Q6PFY8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim45Q6PFY8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim45Q6PFY8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.67■■□□□ 1.06
Trim45Q6PFY8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim45Q6PFY8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim45Q6PFY8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Trim45Q6PFY8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim45Q6PFY8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim45Q6PFY8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim45Q6PFY8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Trim45Q6PFY8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
Trim45Q6PFY8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Trim45Q6PFY8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim45Q6PFY8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.64■■□□□ 1.05
Trim45Q6PFY8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim45Q6PFY8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.64■■□□□ 1.05
Trim45Q6PFY8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim45Q6PFY8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim45Q6PFY8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim45Q6PFY8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim45Q6PFY8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim45Q6PFY8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Trim45Q6PFY8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim45Q6PFY8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.62■■□□□ 1.05
Trim45Q6PFY8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim45Q6PFY8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim45Q6PFY8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim45Q6PFY8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim45Q6PFY8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim45Q6PFY8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim45Q6PFY8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trim45Q6PFY8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim45Q6PFY8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim45Q6PFY8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim45Q6PFY8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trim45Q6PFY8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim45Q6PFY8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim45Q6PFY8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim45Q6PFY8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim45Q6PFY8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Trim45Q6PFY8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim45Q6PFY8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim45Q6PFY8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.56■■□□□ 1.04
Trim45Q6PFY8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim45Q6PFY8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim45Q6PFY8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim45Q6PFY8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim45Q6PFY8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim45Q6PFY8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim45Q6PFY8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim45Q6PFY8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.53■■□□□ 1.04
Trim45Q6PFY8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim45Q6PFY8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim45Q6PFY8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim45Q6PFY8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim45Q6PFY8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim45Q6PFY8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms