Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
Prrt3Q6PE13 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Prrt3Q6PE13 Gm45364-201ENSMUST00000210883 159 ntBASIC24.63■■□□□ 1.53
Prrt3Q6PE13 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Prrt3Q6PE13 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Prrt3Q6PE13 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
Prrt3Q6PE13 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.62■■□□□ 1.53
Prrt3Q6PE13 Mir3960-201ENSMUST00000198213 73 ntBASIC24.62■■□□□ 1.53
Prrt3Q6PE13 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Prrt3Q6PE13 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.62■■□□□ 1.53
Prrt3Q6PE13 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Prrt3Q6PE13 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Prrt3Q6PE13 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.61■■□□□ 1.53
Prrt3Q6PE13 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.61■■□□□ 1.53
Prrt3Q6PE13 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Prrt3Q6PE13 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Prrt3Q6PE13 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.59■■□□□ 1.53
Prrt3Q6PE13 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
Prrt3Q6PE13 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Prrt3Q6PE13 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.58■■□□□ 1.52
Prrt3Q6PE13 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Prrt3Q6PE13 Gm16437-201ENSMUST00000025669 507 ntBASIC24.57■■□□□ 1.52
Prrt3Q6PE13 Gm9806-201ENSMUST00000051080 552 ntBASIC24.57■■□□□ 1.52
Prrt3Q6PE13 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Prrt3Q6PE13 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Prrt3Q6PE13 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Prrt3Q6PE13 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Prrt3Q6PE13 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Prrt3Q6PE13 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Prrt3Q6PE13 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Prrt3Q6PE13 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Prrt3Q6PE13 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Prrt3Q6PE13 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Prrt3Q6PE13 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.54■■□□□ 1.52
Prrt3Q6PE13 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Prrt3Q6PE13 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.54■■□□□ 1.52
Prrt3Q6PE13 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Prrt3Q6PE13 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.54■■□□□ 1.52
Prrt3Q6PE13 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prrt3Q6PE13 Gm11687-201ENSMUST00000118911 886 ntBASIC24.53■■□□□ 1.52
Prrt3Q6PE13 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prrt3Q6PE13 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prrt3Q6PE13 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Prrt3Q6PE13 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Prrt3Q6PE13 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.51■■□□□ 1.51
Prrt3Q6PE13 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Prrt3Q6PE13 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Prrt3Q6PE13 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.49■■□□□ 1.51
Prrt3Q6PE13 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Prrt3Q6PE13 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Prrt3Q6PE13 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Prrt3Q6PE13 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.47■■□□□ 1.51
Prrt3Q6PE13 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.46■■□□□ 1.51
Prrt3Q6PE13 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Prrt3Q6PE13 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Prrt3Q6PE13 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Prrt3Q6PE13 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.45■■□□□ 1.5
Prrt3Q6PE13 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.44■■□□□ 1.5
Prrt3Q6PE13 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.44■■□□□ 1.5
Prrt3Q6PE13 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Prrt3Q6PE13 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Prrt3Q6PE13 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Prrt3Q6PE13 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.43■■□□□ 1.5
Prrt3Q6PE13 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.42■■□□□ 1.5
Prrt3Q6PE13 Gm12366-201ENSMUST00000121722 873 ntBASIC24.42■■□□□ 1.5
Prrt3Q6PE13 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.42■■□□□ 1.5
Prrt3Q6PE13 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prrt3Q6PE13 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prrt3Q6PE13 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.42■■□□□ 1.5
Prrt3Q6PE13 Gm5786-201ENSMUST00000085368 882 ntBASIC24.42■■□□□ 1.5
Prrt3Q6PE13 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Prrt3Q6PE13 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.41■■□□□ 1.5
Prrt3Q6PE13 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Prrt3Q6PE13 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Prrt3Q6PE13 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Prrt3Q6PE13 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.4■■□□□ 1.5
Prrt3Q6PE13 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prrt3Q6PE13 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prrt3Q6PE13 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Prrt3Q6PE13 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Prrt3Q6PE13 Gm27502-201ENSMUST00000183495 199 ntBASIC24.39■■□□□ 1.49
Prrt3Q6PE13 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Prrt3Q6PE13 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Prrt3Q6PE13 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Prrt3Q6PE13 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Prrt3Q6PE13 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prrt3Q6PE13 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prrt3Q6PE13 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prrt3Q6PE13 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prrt3Q6PE13 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Prrt3Q6PE13 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Prrt3Q6PE13 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Prrt3Q6PE13 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Prrt3Q6PE13 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Prrt3Q6PE13 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.35■■□□□ 1.49
Prrt3Q6PE13 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Prrt3Q6PE13 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Prrt3Q6PE13 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Prrt3Q6PE13 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.33■■□□□ 1.49
Prrt3Q6PE13 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms