Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PPP4R3AQ6IN85 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
PPP4R3AQ6IN85 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.96■■■□□ 2.23
PPP4R3AQ6IN85 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PPP4R3AQ6IN85 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PPP4R3AQ6IN85 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.95■■■□□ 2.22
PPP4R3AQ6IN85 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.95■■■□□ 2.22
PPP4R3AQ6IN85 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
PPP4R3AQ6IN85 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PPP4R3AQ6IN85 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
PPP4R3AQ6IN85 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.94■■■□□ 2.22
PPP4R3AQ6IN85 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PPP4R3AQ6IN85 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PPP4R3AQ6IN85 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PPP4R3AQ6IN85 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PPP4R3AQ6IN85 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PPP4R3AQ6IN85 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PPP4R3AQ6IN85 DRD5P2-201ENST00000421395 2012 ntBASIC28.92■■■□□ 2.22
PPP4R3AQ6IN85 AC110285.7-201ENST00000624417 1536 ntBASIC28.91■■■□□ 2.22
PPP4R3AQ6IN85 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
PPP4R3AQ6IN85 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.91■■■□□ 2.22
PPP4R3AQ6IN85 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
PPP4R3AQ6IN85 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.91■■■□□ 2.22
PPP4R3AQ6IN85 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.91■■■□□ 2.22
PPP4R3AQ6IN85 CR559946.2-201ENST00000623684 991 ntBASIC28.9■■■□□ 2.22
PPP4R3AQ6IN85 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PPP4R3AQ6IN85 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PPP4R3AQ6IN85 MIR3648-2-201ENST00000581792 180 ntBASIC28.89■■■□□ 2.22
PPP4R3AQ6IN85 MIR3648-1-201ENST00000615959 180 ntBASIC28.89■■■□□ 2.22
PPP4R3AQ6IN85 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
PPP4R3AQ6IN85 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
PPP4R3AQ6IN85 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
PPP4R3AQ6IN85 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PPP4R3AQ6IN85 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.87■■■□□ 2.21
PPP4R3AQ6IN85 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PPP4R3AQ6IN85 AP002414.2-202ENST00000590929 1450 ntBASIC28.87■■■□□ 2.21
PPP4R3AQ6IN85 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.87■■■□□ 2.21
PPP4R3AQ6IN85 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.87■■■□□ 2.21
PPP4R3AQ6IN85 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.87■■■□□ 2.21
PPP4R3AQ6IN85 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.87■■■□□ 2.21
PPP4R3AQ6IN85 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PPP4R3AQ6IN85 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
PPP4R3AQ6IN85 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.86■■■□□ 2.21
PPP4R3AQ6IN85 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
PPP4R3AQ6IN85 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.85■■■□□ 2.21
PPP4R3AQ6IN85 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
PPP4R3AQ6IN85 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PPP4R3AQ6IN85 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
PPP4R3AQ6IN85 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.84■■■□□ 2.21
PPP4R3AQ6IN85 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
PPP4R3AQ6IN85 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PPP4R3AQ6IN85 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R3AQ6IN85 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R3AQ6IN85 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R3AQ6IN85 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.83■■■□□ 2.21
PPP4R3AQ6IN85 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R3AQ6IN85 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R3AQ6IN85 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
PPP4R3AQ6IN85 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R3AQ6IN85 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
PPP4R3AQ6IN85 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
PPP4R3AQ6IN85 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R3AQ6IN85 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.8■■■□□ 2.2
PPP4R3AQ6IN85 AC016575.1-201ENST00000607026 382 ntBASIC28.8■■■□□ 2.2
PPP4R3AQ6IN85 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.8■■■□□ 2.2
PPP4R3AQ6IN85 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R3AQ6IN85 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R3AQ6IN85 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.79■■■□□ 2.2
PPP4R3AQ6IN85 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R3AQ6IN85 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.79■■■□□ 2.2
PPP4R3AQ6IN85 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R3AQ6IN85 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R3AQ6IN85 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R3AQ6IN85 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.77■■■□□ 2.2
PPP4R3AQ6IN85 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PPP4R3AQ6IN85 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
PPP4R3AQ6IN85 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R3AQ6IN85 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.75■■■□□ 2.19
PPP4R3AQ6IN85 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R3AQ6IN85 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R3AQ6IN85 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R3AQ6IN85 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PPP4R3AQ6IN85 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PPP4R3AQ6IN85 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
PPP4R3AQ6IN85 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
PPP4R3AQ6IN85 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
PPP4R3AQ6IN85 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
PPP4R3AQ6IN85 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PPP4R3AQ6IN85 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
PPP4R3AQ6IN85 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.72■■■□□ 2.19
PPP4R3AQ6IN85 AC142086.6-201ENST00000621154 1765 ntBASIC28.72■■■□□ 2.19
PPP4R3AQ6IN85 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PPP4R3AQ6IN85 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
PPP4R3AQ6IN85 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
PPP4R3AQ6IN85 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.71■■■□□ 2.19
PPP4R3AQ6IN85 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
PPP4R3AQ6IN85 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
PPP4R3AQ6IN85 AC008813.1-201ENST00000536597 885 ntBASIC28.7■■■□□ 2.18
PPP4R3AQ6IN85 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
PPP4R3AQ6IN85 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 419.3 ms