Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SpenQ62504 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SpenQ62504 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.4■■□□□ 1.02
SpenQ62504 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.4■■□□□ 1.02
SpenQ62504 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SpenQ62504 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SpenQ62504 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SpenQ62504 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.39■■□□□ 1.02
SpenQ62504 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SpenQ62504 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SpenQ62504 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SpenQ62504 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SpenQ62504 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SpenQ62504 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SpenQ62504 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.37■■□□□ 1.01
SpenQ62504 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SpenQ62504 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.37■■□□□ 1.01
SpenQ62504 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SpenQ62504 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.37■■□□□ 1.01
SpenQ62504 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.37■■□□□ 1.01
SpenQ62504 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.36■■□□□ 1.01
SpenQ62504 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.36■■□□□ 1.01
SpenQ62504 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SpenQ62504 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.36■■□□□ 1.01
SpenQ62504 Mir3960-201ENSMUST00000198213 73 ntBASIC21.36■■□□□ 1.01
SpenQ62504 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SpenQ62504 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SpenQ62504 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SpenQ62504 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.35■■□□□ 1.01
SpenQ62504 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SpenQ62504 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.35■■□□□ 1.01
SpenQ62504 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SpenQ62504 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SpenQ62504 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SpenQ62504 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SpenQ62504 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SpenQ62504 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SpenQ62504 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SpenQ62504 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SpenQ62504 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SpenQ62504 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SpenQ62504 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SpenQ62504 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SpenQ62504 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.32■■□□□ 1
SpenQ62504 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SpenQ62504 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SpenQ62504 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SpenQ62504 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SpenQ62504 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.3■■□□□ 1
SpenQ62504 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SpenQ62504 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SpenQ62504 Gm15546-201ENSMUST00000122095 826 ntBASIC21.28■■□□□ 1
SpenQ62504 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.28■■□□□ 1
SpenQ62504 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SpenQ62504 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.28■■□□□ 1
SpenQ62504 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.26■□□□□ 0.99
SpenQ62504 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.25■□□□□ 0.99
SpenQ62504 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SpenQ62504 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.25■□□□□ 0.99
SpenQ62504 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SpenQ62504 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SpenQ62504 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SpenQ62504 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.24■□□□□ 0.99
SpenQ62504 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SpenQ62504 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SpenQ62504 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SpenQ62504 Gm10420-201ENSMUST00000121713 882 ntBASIC21.24■□□□□ 0.99
SpenQ62504 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SpenQ62504 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SpenQ62504 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SpenQ62504 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SpenQ62504 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SpenQ62504 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.22■□□□□ 0.99
SpenQ62504 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SpenQ62504 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.22■□□□□ 0.99
SpenQ62504 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.21■□□□□ 0.99
SpenQ62504 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.21■□□□□ 0.99
SpenQ62504 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SpenQ62504 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SpenQ62504 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SpenQ62504 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SpenQ62504 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SpenQ62504 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SpenQ62504 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SpenQ62504 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SpenQ62504 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.16■□□□□ 0.98
SpenQ62504 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.16■□□□□ 0.98
SpenQ62504 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SpenQ62504 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.16■□□□□ 0.98
SpenQ62504 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.15■□□□□ 0.98
SpenQ62504 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpenQ62504 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpenQ62504 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.15■□□□□ 0.98
SpenQ62504 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SpenQ62504 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SpenQ62504 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SpenQ62504 Gm9812-201ENSMUST00000061934 968 ntBASIC21.14■□□□□ 0.97
SpenQ62504 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SpenQ62504 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SpenQ62504 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms